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Protein

UPF0092 membrane protein RC0893

Gene

RC0893

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0092 membrane protein RC0893
Gene namesi
Ordered Locus Names:RC0893
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
Proteomesi
  • UP000000816 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei33 – 5321HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 141141UPF0092 membrane protein RC0893PRO_0000282378Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ92H78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiTSLIPMI.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92H78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSANTQDNQA NNNDTIEIQE TEVVPAETNS LQSGLTSLIP MVLIFAVFYF
60 70 80 90 100
LLLRPQETRR KEREKLVSEV KKGEEVLTNS GIYGIVTKVS ENDNNIEIEI
110 120 130 140
AKDVRIKVLK SAIIDITSRT KEVAVKKENK KNKKVSGAKA S
Length:141
Mass (Da):15,734
Last modified:December 1, 2001 - v1
Checksum:i1A8F25FD3F9BC642
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03431.1.
PIRiE97811.
RefSeqiWP_004998024.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL03431; AAL03431; RC0893.
GeneIDi928866.
KEGGirco:RC0893.
PATRICi17889156. VBIRicCon45613_1017.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03431.1.
PIRiE97811.
RefSeqiWP_004998024.1. NC_003103.1.

3D structure databases

ProteinModelPortaliQ92H78.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL03431; AAL03431; RC0893.
GeneIDi928866.
KEGGirco:RC0893.
PATRICi17889156. VBIRicCon45613_1017.

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiTSLIPMI.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiY893_RICCN
AccessioniPrimary (citable) accession number: Q92H78
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: December 1, 2001
Last modified: May 11, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia conorii
    (strain Malish 7): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.