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Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8UniRule annotation
Gene namesi
Name:rpsHUniRule annotation
Ordered Locus Names:RC0992
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13213230S ribosomal protein S8PRO_0000126474Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ92GY0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204095.
KOiK02994.
OMAiKYKGNQS.
OrthoDBiEOG6Z0QH1.

Family and domain databases

HAMAPiMF_01302_B. Ribosomal_S8_B.
InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92GY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMTDNVADM LTRIRNAYKS KLINVSFPSS KIKTSILDVL QKEGYIKDYI
60 70 80 90 100
TTQKNNISYT EVALKYSVNG DASICEIHRV SKPGKRVYSA IKDLKGYYNN
110 120 130
MGIYILSTPY GVMSDREAHI KNVGGEVICK VF
Length:132
Mass (Da):14,871
Last modified:December 1, 2001 - v1
Checksum:i151E46C6BD96145C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03530.1.
PIRiH97823.
RefSeqiNP_360629.1. NC_003103.1.
WP_010977581.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL03530; AAL03530; RC0992.
GeneIDi928137.
KEGGirco:RC0992.
PATRICi17889390. VBIRicCon45613_1132.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03530.1.
PIRiH97823.
RefSeqiNP_360629.1. NC_003103.1.
WP_010977581.1. NC_003103.1.

3D structure databases

ProteinModelPortaliQ92GY0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL03530; AAL03530; RC0992.
GeneIDi928137.
KEGGirco:RC0992.
PATRICi17889390. VBIRicCon45613_1132.

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204095.
KOiK02994.
OMAiKYKGNQS.
OrthoDBiEOG6Z0QH1.

Family and domain databases

HAMAPiMF_01302_B. Ribosomal_S8_B.
InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiRS8_RICCN
AccessioniPrimary (citable) accession number: Q92GY0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 19, 2002
Last sequence update: December 1, 2001
Last modified: June 24, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia conorii
    (strain Malish 7): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.