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Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S3UniRule annotation
Gene namesi
Name:rpsCUniRule annotation
Ordered Locus Names:RC1000
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 21721730S ribosomal protein S3PRO_0000130186Add
BLAST

Proteomic databases

PRIDEiQ92GX2.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ92GX2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 11071KH type-2UniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S3P family.UniRule annotation
Contains 1 KH type-2 domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0092.
HOGENOMiHOG000210610.
KOiK02982.
OMAiMGQKTNP.
OrthoDBiEOG6K13X3.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92GX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQKVCAHGF RVGPTLIKGW DSILYAEKHY KTLFIQDLKI RDLINKGFNQ
60 70 80 90 100
AQISRVLIER PSNKSIIINI NAKKPNIIIG RNGSEIDKLK KAIEKMTSLK
110 120 130 140 150
EVYINIHEVR KFNIDAAIVA QTIALQLEKR VSFRKAMKTA IQASFKQGGQ
160 170 180 190 200
GIRVSCSGRL GGAEIARTEW YIEGRMPLHT LRADIDYSTA EAITTYGVIG
210
VKVWIYKGEY TENKRYN
Length:217
Mass (Da):24,587
Last modified:December 1, 2001 - v1
Checksum:i630F8B7138229E0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03538.1.
PIRiH97824.
RefSeqiNP_360637.1. NC_003103.1.
WP_010977584.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL03538; AAL03538; RC1000.
GeneIDi928142.
KEGGirco:RC1000.
PATRICi17889406. VBIRicCon45613_1140.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL03538.1.
PIRiH97824.
RefSeqiNP_360637.1. NC_003103.1.
WP_010977584.1. NC_003103.1.

3D structure databases

ProteinModelPortaliQ92GX2.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ92GX2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL03538; AAL03538; RC1000.
GeneIDi928142.
KEGGirco:RC1000.
PATRICi17889406. VBIRicCon45613_1140.

Phylogenomic databases

eggNOGiCOG0092.
HOGENOMiHOG000210610.
KOiK02982.
OMAiMGQKTNP.
OrthoDBiEOG6K13X3.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiRS3_RICCN
AccessioniPrimary (citable) accession number: Q92GX2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2003
Last sequence update: December 1, 2001
Last modified: June 24, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia conorii
    (strain Malish 7): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.