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Q92GX2 (RS3_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S3
Gene names
Name:rpsC
Ordered Locus Names:RC1000
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length217 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation By similarity. HAMAP-Rule MF_01309

Subunit structure

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14 By similarity.

Sequence similarities

Belongs to the ribosomal protein S3P family.

Contains 1 KH type-2 domain.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 21721730S ribosomal protein S3 HAMAP-Rule MF_01309
PRO_0000130186

Regions

Domain40 – 11071KH type-2

Sequences

Sequence LengthMass (Da)Tools
Q92GX2 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 630F8B7138229E0D

FASTA21724,587
        10         20         30         40         50         60 
MGQKVCAHGF RVGPTLIKGW DSILYAEKHY KTLFIQDLKI RDLINKGFNQ AQISRVLIER 

        70         80         90        100        110        120 
PSNKSIIINI NAKKPNIIIG RNGSEIDKLK KAIEKMTSLK EVYINIHEVR KFNIDAAIVA 

       130        140        150        160        170        180 
QTIALQLEKR VSFRKAMKTA IQASFKQGGQ GIRVSCSGRL GGAEIARTEW YIEGRMPLHT 

       190        200        210 
LRADIDYSTA EAITTYGVIG VKVWIYKGEY TENKRYN 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006914 Genomic DNA. Translation: AAL03538.1.
PIRH97824.
RefSeqNP_360637.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92GX2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272944.RC1000.

Proteomic databases

PRIDEQ92GX2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL03538; AAL03538; RC1000.
GeneID928142.
KEGGrco:RC1000.
PATRIC17889406. VBIRicCon45613_1140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0092.
HOGENOMHOG000210610.
KOK02982.
OMAIARAEWY.
OrthoDBEOG6K13X3.

Family and domain databases

Gene3D3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPMF_01309_B. Ribosomal_S3_B.
InterProIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTSM00322. KH. 1 hit.
[Graphical view]
SUPFAMSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsTIGR01009. rpsC_bact. 1 hit.
PROSITEPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS3_RICCN
AccessionPrimary (citable) accession number: Q92GX2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 10, 2003
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia conorii

(strain Malish 7): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries