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Q92GC8

- Y1195_RICCN

UniProt

Q92GC8 - Y1195_RICCN

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Protein
Uncharacterized HTH-type transcriptional regulator RC1195
Gene
RC1195
Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi53 – 7220H-T-H motif Reviewed prediction
Add
BLAST

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator RC1195
Gene namesi
Ordered Locus Names:RC1195
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 109109Uncharacterized HTH-type transcriptional regulator RC1195
PRO_0000149782Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272944.RC1195.

Structurei

3D structure databases

ProteinModelPortaliQ92GC8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 10059HTH cro/C1-type
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1396.
HOGENOMiHOG000010795.
OMAiLCIYLSF.
OrthoDBiEOG6GR3D0.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamiPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92GC8-1 [UniParc]FASTAAdd to Basket

« Hide

MKLSRLFDPC NKAGNTRLCI YLSFIYSEVI NMALATKVKE FLEEKLKQEK    50
IDRKYLAEVT NIPYTTVSRI MRAEANREFN PEIDTILKIA KYFNCTMDEV 100
IKRKVQNNS 109
Length:109
Mass (Da):12,804
Last modified:December 1, 2001 - v1
Checksum:iCAA18564EECB6287
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006914 Genomic DNA. Translation: AAL03733.1.
PIRiC97849.
RefSeqiNP_360832.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL03733; AAL03733; RC1195.
GeneIDi928348.
KEGGirco:RC1195.
PATRICi17889878. VBIRicCon45613_1371.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006914 Genomic DNA. Translation: AAL03733.1 .
PIRi C97849.
RefSeqi NP_360832.1. NC_003103.1.

3D structure databases

ProteinModelPortali Q92GC8.
ModBasei Search...

Protein-protein interaction databases

STRINGi 272944.RC1195.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAL03733 ; AAL03733 ; RC1195 .
GeneIDi 928348.
KEGGi rco:RC1195.
PATRICi 17889878. VBIRicCon45613_1371.

Phylogenomic databases

eggNOGi COG1396.
HOGENOMi HOG000010795.
OMAi LCIYLSF.
OrthoDBi EOG6GR3D0.

Family and domain databases

Gene3Di 1.10.260.40. 1 hit.
InterProi IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view ]
Pfami PF01381. HTH_3. 1 hit.
[Graphical view ]
SMARTi SM00530. HTH_XRE. 1 hit.
[Graphical view ]
SUPFAMi SSF47413. SSF47413. 1 hit.
PROSITEi PS50943. HTH_CROC1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiY1195_RICCN
AccessioniPrimary (citable) accession number: Q92GC8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 21, 2003
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia conorii
    (strain Malish 7): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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