Q92GC8 (Y1195_RICCN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized HTH-type transcriptional regulator RC1195

Gene names

Ordered Locus Names:

RC1195

Organism

Rickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]

Taxonomic identifier

272944 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group › Rickettsia conorii

Protein attributes

Sequence length	109 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH cro/C1-type DNA-binding domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 109	109	Uncharacterized HTH-type transcriptional regulator RC1195		PRO_0000149782
Regions
	Domain	42 – 100	59	HTH cro/C1-type
	DNA binding	53 – 72	20	H-T-H motif Potential

Sequences

	Sequence		Length	Mass (Da)
	Q92GC8 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: CAA18564EECB6287	FASTA	109	12,804
	10 20 30 40 50 60 MKLSRLFDPC NKAGNTRLCI YLSFIYSEVI NMALATKVKE FLEEKLKQEK IDRKYLAEVT 70 80 90 100 NIPYTTVSRI MRAEANREFN PEIDTILKIA KYFNCTMDEV IKRKVQNNS

References

[1]

"Mechanisms of evolution in Rickettsia conorii and R. prowazekii." Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D. Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE006914 Genomic DNA. Translation: AAL03733.1.
PIR	C97849.
RefSeq	NP_360832.1. NC_003103.1.
3D structure databases
ProteinModelPortal	Q92GC8.
ModBase	Search...
Protein-protein interaction databases
STRING	272944.RC1195.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAL03733; AAL03733; RC1195.
GeneID	928348.
KEGG	rco:RC1195.
PATRIC	17889878. VBIRicCon45613_1371.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1396.
HOGENOM	HOG000010795.
OMA	NMALATK.
ProtClustDB	CLSK871067.
Family and domain databases
Gene3D	1.10.260.40. 1 hit.
InterPro	IPR001387. HTH. IPR010982. Lambda_DNA-bd_dom. [Graphical view]
Pfam	PF01381. HTH_3. 1 hit. [Graphical view]
SMART	SM00530. HTH_XRE. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit.
PROSITE	PS50943. HTH_CROC1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y1195_RICCN

Accession

Primary (citable) accession number: Q92GC8

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 21, 2003
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program