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Q92GC8 (Y1195_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized HTH-type transcriptional regulator RC1195
Gene names
Ordered Locus Names:RC1195
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length109 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH cro/C1-type DNA-binding domain.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 109109Uncharacterized HTH-type transcriptional regulator RC1195
PRO_0000149782

Regions

Domain42 – 10059HTH cro/C1-type
DNA binding53 – 7220H-T-H motif Potential

Sequences

Sequence LengthMass (Da)Tools
Q92GC8 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: CAA18564EECB6287

FASTA10912,804
        10         20         30         40         50         60 
MKLSRLFDPC NKAGNTRLCI YLSFIYSEVI NMALATKVKE FLEEKLKQEK IDRKYLAEVT 

        70         80         90        100 
NIPYTTVSRI MRAEANREFN PEIDTILKIA KYFNCTMDEV IKRKVQNNS 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006914 Genomic DNA. Translation: AAL03733.1.
PIRC97849.
RefSeqNP_360832.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92GC8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272944.RC1195.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL03733; AAL03733; RC1195.
GeneID928348.
KEGGrco:RC1195.
PATRIC17889878. VBIRicCon45613_1371.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1396.
HOGENOMHOG000010795.
OMANMALATK.
OrthoDBEOG6GR3D0.
ProtClustDBCLSK871067.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
InterProIPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
[Graphical view]
PfamPF01381. HTH_3. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1195_RICCN
AccessionPrimary (citable) accession number: Q92GC8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 21, 2003
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia conorii

(strain Malish 7): entries and gene names