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Q92GC8

- Y1195_RICCN

UniProt

Q92GC8 - Y1195_RICCN

Protein

Uncharacterized HTH-type transcriptional regulator RC1195

Gene

RC1195

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    DNA bindingi53 – 7220H-T-H motifPROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. sequence-specific DNA binding Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized HTH-type transcriptional regulator RC1195
    Gene namesi
    Ordered Locus Names:RC1195
    OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
    Taxonomic identifieri272944 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000000816: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 109109Uncharacterized HTH-type transcriptional regulator RC1195PRO_0000149782Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi272944.RC1195.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92GC8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini42 – 10059HTH cro/C1-typePROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 HTH cro/C1-type DNA-binding domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG1396.
    HOGENOMiHOG000010795.
    OMAiLCIYLSF.
    OrthoDBiEOG6GR3D0.

    Family and domain databases

    Gene3Di1.10.260.40. 1 hit.
    InterProiIPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    [Graphical view]
    PfamiPF01381. HTH_3. 1 hit.
    [Graphical view]
    SMARTiSM00530. HTH_XRE. 1 hit.
    [Graphical view]
    SUPFAMiSSF47413. SSF47413. 1 hit.
    PROSITEiPS50943. HTH_CROC1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92GC8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLSRLFDPC NKAGNTRLCI YLSFIYSEVI NMALATKVKE FLEEKLKQEK    50
    IDRKYLAEVT NIPYTTVSRI MRAEANREFN PEIDTILKIA KYFNCTMDEV 100
    IKRKVQNNS 109
    Length:109
    Mass (Da):12,804
    Last modified:December 1, 2001 - v1
    Checksum:iCAA18564EECB6287
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03733.1.
    PIRiC97849.
    RefSeqiNP_360832.1. NC_003103.1.

    Genome annotation databases

    EnsemblBacteriaiAAL03733; AAL03733; RC1195.
    GeneIDi928348.
    KEGGirco:RC1195.
    PATRICi17889878. VBIRicCon45613_1371.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03733.1 .
    PIRi C97849.
    RefSeqi NP_360832.1. NC_003103.1.

    3D structure databases

    ProteinModelPortali Q92GC8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272944.RC1195.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL03733 ; AAL03733 ; RC1195 .
    GeneIDi 928348.
    KEGGi rco:RC1195.
    PATRICi 17889878. VBIRicCon45613_1371.

    Phylogenomic databases

    eggNOGi COG1396.
    HOGENOMi HOG000010795.
    OMAi LCIYLSF.
    OrthoDBi EOG6GR3D0.

    Family and domain databases

    Gene3Di 1.10.260.40. 1 hit.
    InterProi IPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    [Graphical view ]
    Pfami PF01381. HTH_3. 1 hit.
    [Graphical view ]
    SMARTi SM00530. HTH_XRE. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47413. SSF47413. 1 hit.
    PROSITEi PS50943. HTH_CROC1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-613 / Malish 7.

    Entry informationi

    Entry nameiY1195_RICCN
    AccessioniPrimary (citable) accession number: Q92GC8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 21, 2003
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia conorii
      (strain Malish 7): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3