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Protein

DNA replication and repair protein RecF

Gene

recF

Organism
Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi30 – 37ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processDNA damage, DNA repair, DNA replication, SOS response
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA replication and repair protein RecFUniRule annotation
Gene namesi
Name:recFUniRule annotation
Ordered Locus Names:lin0005
OrganismiListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001964281 – 370DNA replication and repair protein RecFAdd BLAST370

Proteomic databases

PRIDEiQ92FU8

Interactioni

Protein-protein interaction databases

STRINGi272626.lin0005

Structurei

3D structure databases

ProteinModelPortaliQ92FU8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RecF family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C3X Bacteria
COG1195 LUCA
HOGENOMiHOG000269559
KOiK03629
OMAiGQQKSFL
OrthoDBiPOG091H00U7

Family and domain databases

HAMAPiMF_00365 RecF, 1 hit
InterProiView protein in InterPro
IPR001238 DNA-binding_RecF
IPR018078 DNA-binding_RecF_CS
IPR027417 P-loop_NTPase
IPR003395 RecF/RecN/SMC_N
PANTHERiPTHR32182:SF0 PTHR32182:SF0, 1 hit
PfamiView protein in Pfam
PF02463 SMC_N, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00611 recf, 1 hit
PROSITEiView protein in PROSITE
PS00617 RECF_1, 1 hit
PS00618 RECF_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q92FU8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHLESIVLRN FRNYENLELE FSPSVNVFLG ENAQGKTNLL EAVLMLALAK
60 70 80 90 100
SHRTTNDKDF IMWEKEEAKM EGRVVKRGQT VPLELAITQK GKRAKVNHLE
110 120 130 140 150
QKKLSQYVGN LNVVIFAPED LSLVKGAPGV RRRFLNMEIG QMQPIYLHNL
160 170 180 190 200
SEYQRILQQR NQYLKMLQMK RKVDPMLLDI LTEQFADVAI NLTKRRADFI
210 220 230 240 250
QKLEAYAAPI HHQISRGLET LKIEYKASVT LNGDDPEVWK ADLLQKMESI
260 270 280 290 300
KQREIDRGVT LIGPHRDDSL FYINGQNVQD FGSQGQQRTT ALSVKLAEID
310 320 330 340 350
LIHEETGEYP VLLLDDVLSE LDDYRQSHLL GAIEGKVQTF VTTTSTSGID
360 370
HNTLRQATTF YVEKGTVKKS
Length:370
Mass (Da):42,291
Last modified:December 1, 2001 - v1
Checksum:i3D611A74EC4F13E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596163 Genomic DNA Translation: CAC95238.1
PIRiAF1433
RefSeqiWP_010990153.1, NC_003212.1

Genome annotation databases

EnsemblBacteriaiCAC95238; CAC95238; CAC95238
KEGGilin:RecF

Similar proteinsi

Entry informationi

Entry nameiRECF_LISIN
AccessioniPrimary (citable) accession number: Q92FU8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2002
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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