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Protein
Submitted name:

Lin0032 protein

Gene

lin0032

Organism
Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Submitted name:
Lin0032 proteinImported
Gene namesi
Ordered Locus Names:lin0032Imported
OrganismiListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)Imported
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272626.lin0032.

Structurei

3D structure databases

ProteinModelPortaliQ92FS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini228 – 29669CelD_NInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105E08. Bacteria.
ENOG410XNTA. LUCA.
HOGENOMiHOG000235973.
OMAiGWHDAAD.
OrthoDBiPOG091H04FT.

Family and domain databases

Gene3Di1.50.10.10. 2 hits.
2.60.40.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR004197. Cellulase_Ig-like.
IPR001701. Glyco_hydro_9.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PfamiPF02927. CelD_N. 1 hit.
PF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 3 hits.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92FS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPKMKQQIV QTGIIHRPLP IETEHALETI AKKKQVLSSR TLLSSEKQVS
60 70 80 90 100
LDFTHQGAGD FVISDQGEIK LTSPVVMPHW PAGAPDDGDY TNFGNVLISA
110 120 130 140 150
PLQNEDWNSF NRVRIQVFPD FPGVTNPYLM ISFKNDGTVK VPDIYGREGV
160 170 180 190 200
HGVNLINHEW NDVIFEIEGL PRDKMTEISF SYYLNGPERL TAGTMELFIS
210 220 230 240 250
EIKLEQISEP EISKGWIPQD NSLIYSHNGY TKDMPKIAFC ANKLEANSFT
260 270 280 290 300
IHEKETNKVV FTGKGYQNTT ETGNFIILDF SDLQTVGEYY LKFAEMQSEL
310 320 330 340 350
FQFGTSEVIW ESSIWKSLNF IFCERCGCPI FGKHTTCHAD IIAEHNGKQL
360 370 380 390 400
SFNGGWHDAG DVSQQLIQTA EVTMALYEMA ASLSEKDEML RMRLLEEGEW
410 420 430 440 450
GLDFILKTRF GDGFRATSAG MTRWTDGLVG GMDDAIARVH NQAYENFYCA
460 470 480 490 500
GIEAYIGSQI QDNATMQNHL LRIAEEDLLF AIAELEKHGT GQKPIFWEHT
510 520 530 540 550
YQTSESLYYA TASWAASMVY QLTNKEIYAE KAAEWLDLML EAQEKTGIKD
560 570 580 590 600
SETSELYKGF FYRDKTHNVI QHFNHQAREH LYLMALEVAL ETQPGHAEKQ
610 620 630 640 650
TWLQAVEMYG DYLKKVTRFT KPYPLIPAGL YKKDEYLDEA SFHLQHLLID
660 670 680 690 700
ERAIEEYQLQ FEQGIKINDE IALRKFPIWF SFRGNNAILL SAGKAASIAG
710 720 730 740 750
KILQDKALLN IAEGQLQWVI GMNPFGQSMM HGEGYRYAQQ YSVLNGEITG
760 770 780 790 800
EIPVGMETFR NEDEPYWPEF NNATYKEVWV GNAGKWMSIV ADLNKITGKS
Length:800
Mass (Da):91,009
Last modified:December 1, 2001 - v1
Checksum:iD5EF0B9D410ED6E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596163 Genomic DNA. Translation: CAC95265.1.
PIRiAI1436.
RefSeqiWP_010990165.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC95265; CAC95265; CAC95265.
KEGGilin:lin0032.
PATRICi20296688. VBILisInn102668_0034.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596163 Genomic DNA. Translation: CAC95265.1.
PIRiAI1436.
RefSeqiWP_010990165.1. NC_003212.1.

3D structure databases

ProteinModelPortaliQ92FS1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272626.lin0032.

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC95265; CAC95265; CAC95265.
KEGGilin:lin0032.
PATRICi20296688. VBILisInn102668_0034.

Phylogenomic databases

eggNOGiENOG4105E08. Bacteria.
ENOG410XNTA. LUCA.
HOGENOMiHOG000235973.
OMAiGWHDAAD.
OrthoDBiPOG091H04FT.

Family and domain databases

Gene3Di1.50.10.10. 2 hits.
2.60.40.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR004197. Cellulase_Ig-like.
IPR001701. Glyco_hydro_9.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PfamiPF02927. CelD_N. 1 hit.
PF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 3 hits.
SSF81296. SSF81296. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ92FS1_LISIN
AccessioniPrimary (citable) accession number: Q92FS1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: September 7, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.