Q92FF3 (Q92FF3_LISIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lin0153 protein EMBL CAC95386.1

Gene names

Ordered Locus Names:

lin0153

Organism

Listeria innocua [Complete proteome] [HAMAP]

Taxonomic identifier

1642 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	756 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453 Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q92FF3 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 39CDB1C5399BB50F	FASTA	756	81,574
	10 20 30 40 50 60 MKKLFSITSV VLLVLSLVVV SIGAESKRAK AAENVPQYRN VMYYGDWSIW GGEGNFYPKD 70 80 90 100 110 120 IPADQLTHLN FAFLDFNSNG DLVFTDKDAA VGAPVGQEGV QWGGANAGVL NAIQDLRAQN 130 140 150 160 170 180 PNLKIGVSVG GWSKSGDFST VAADPTKRAN FVKNVMKFVK YTNMDFVDLD WEYPASVRDA 190 200 210 220 230 240 DLVDNKNDEG TPNAKPADKQ NFITLLQDLR TALDKQGVDI NKKYELSVAL PAAKSTLENG 250 260 270 280 290 300 VDVANLFKVV DFANVMTYDL NGAWTPNSAH HTALYGNPKD PNYNSGFSVD QTVKYLKEKG 310 320 330 340 350 360 AVSNKIVVGA AFYTRGWNKV AAGTDTALPG LFQAAEKTNK DADGSLTYGA NNENPIKTGD 370 380 390 400 410 420 GGRAGGVWAY RSIDALKAKT PTLKEYWDDT AKAPYLYSKE TGEFYTYDNT RSIGYKAQYV 430 440 450 460 470 480 KDNNLGGMIS WMQSQDKTTT STKRDELTKA IKTGLFGTSA IPQNAITYAN LNVVATVKPY 490 500 510 520 530 540 SENGVGYEIT ITNNEKADET NEVLKSTELS FETVKLPKFY IPVKAGETLT AGDYKAGTVT 550 560 570 580 590 600 TSGGNTVVDL ASVYDAQQIP QGASYTFRLK SSASSVDVNN ISKIDLTQRM VKSSVEFGKQ 610 620 630 640 650 660 TIFGGGTVVP DPSDTEAPTV PKSLASSNVT DKSVTLSWTA STDNKAVAGY KVYRNGTEVG 670 680 690 700 710 720 SVSGTTFTDS GLTAKTAYTY TVKAYDAAGN FSAASSALTV TTLDAATPPA TPAWDAAKTY 730 740 750 NKGDRVSYKG KTYEAQWWTQ GNEPGAEQWG PWLLIN

References

[1]

"Comparative genomics of Listeria species." Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E. , Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. Science 294:849-852(2001) [PubMed: 11679669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP 11262 / Serovar 6a.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL596163 Genomic DNA. Translation: CAC95386.1.
PIR	AB1452.
RefSeq	NP_469498.1. NC_003212.1.
3D structure databases
HSSP	HSSP built from PDB template 1K85 based on UniProtKB P20533.
ProteinModelPortal	Q92FF3.
SMR	Q92FF3. Positions 617-702.
ModBase	Search...
Protein family/group databases
CAZy	CBM5. Carbohydrate-Binding Module Family 5. GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1128546.
GenomeReviews	Gene locus lin0153 in contig AL592022_GR.
KEGG	lin:lin0153.
NMPDR	fig|272626.1.peg.151.
PATRIC	20296952. VBILisInn102668_0165.
Organism-specific databases
GenoList	LIN0153.
CMR	Search...
Phylogenomic databases
HOGENOM	HBG422984.
OMA	YGANNEN.
ProtClustDB	CLSK563779.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR011583. Chitinase_II. IPR003961. Fibronectin_type3. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K01183.
Pfam	PF02839. CBM_5_12. 1 hit. PF00041. fn3. 1 hit. PF00704. Glyco_hydro_18. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 1 hit. SM00060. FN3. 1 hit. SM00636. Glyco_18. 1 hit. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF49265. FN_III-like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS50853. FN3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q92FF3_LISIN

Accession

Primary (citable) accession number: Q92FF3

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	December 14, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)