Q92F20 (Q92F20_LISIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lin0288 protein EMBL CAC95521.1

Gene names

Ordered Locus Names:

lin0288

Organism

Listeria innocua [Complete proteome] [HAMAP]

Taxonomic identifier

1642 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	486 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004468 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q92F20 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 24B4CDA39BCB73EA	FASTA	486	55,591
	10 20 30 40 50 60 MTEVKKQFPK GFLWGGATAA NQVEGAYDVD GKGLSTADMV KFIPKEERTK DHALDVSKAE 70 80 90 100 110 120 IEAIIAGKVE GRFPKREGVD FYHRYKEDIA LFAEMGFKTF RLSLNWARIF PNGDDKEPNE 130 140 150 160 170 180 KGLEFYDKVF DELLKYDIEP LVTLSHYETP LNLTLKYNGW ADRRVIGFFT NYAETVFKRY 190 200 210 220 230 240 KNKVKYWLTF NEINVISLSA YTGGGVLLED AKNPLELSYQ AGHHQFVASA LATKLAHEII 250 260 270 280 290 300 PGSQVGCMLA RMATYPATNN PDDILKAQYE NQQNLFFTDV HARGEYPSYM NRFFQENDIN 310 320 330 340 350 360 IVKEVGDDEI LKAHTVDFIS FSYYMSLSAT ASPEGDRSAG NLMGGVKNEY LESSDWGWQI 370 380 390 400 410 420 DPKGLRWTLN DLYSRYELPL FIVENGLGAY DTVEEDGKIH DDYRIDYLRK HIEQMKEAIA 430 440 450 460 470 480 DGVDLMGYTS WGPIDLVSAS TSEMSKRYGF IYVDQDDWGK GTLERSRKDS FFWYKKVIET NGEDLD

References

[1]

"Comparative genomics of Listeria species." Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E. , Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. Science 294:849-852(2001) [PubMed: 11679669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP 11262 / Serovar 6a.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL596164 Genomic DNA. Translation: CAC95521.1.
PIR	AI1468.
RefSeq	NP_469633.1. NC_003212.1.
3D structure databases
HSSP	HSSP built from PDB template 1GON based on UniProtKB Q59976.
ProteinModelPortal	Q92F20.
ModBase	Search...
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1128704.
GenomeReviews	Gene locus lin0288 in contig AL592022_GR.
KEGG	lin:lin0288.
NMPDR	fig|272626.1.peg.286.
PATRIC	20297256. VBILisInn102668_0302.
Organism-specific databases
GenoList	LIN0288.
CMR	Search...
Phylogenomic databases
HOGENOM	HBG316462.
OMA	FNEINAS.
ProtClustDB	CLSK894897.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01188.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q92F20_LISIN

Accession

Primary (citable) accession number: Q92F20

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)