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Protein
Submitted name:

Lin0431 protein

Gene

lin0431

Organism
Listeria innocua serovar 6a (strain CLIP 11262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Lin0431 proteinImported
Gene namesi
Ordered Locus Names:lin0431Imported
OrganismiListeria innocua serovar 6a (strain CLIP 11262)Imported
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535Sequence analysisAdd
BLAST
Chaini36 – 140105Sequence analysisPRO_5004318633Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272626.lin0431.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KPPNMR-A36-140[»]
3LD7X-ray1.55A/B/C36-127[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ92EM7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini15 – 125111NusG_IIInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105R4C. Bacteria.
COG5341. LUCA.
HOGENOMiHOG000232258.
OMAiWISRIGQ.
OrthoDBiEOG6WQD8N.

Family and domain databases

Gene3Di2.60.320.10. 1 hit.
InterProiIPR024045. NusG_dom2.
[Graphical view]
PfamiPF07009. NusG_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92EM7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRQYMKMVRP FDFVIIVALI LGSFLPLLLF SVAEAKNTGD EVVAIISQNG
60 70 80 90 100
KVIREIPLTG HKGNEQFTIK GKGAQYNLME VDGERIRIKE DNSPDQVGVK
110 120 130 140
MGWKSKAGDT IVCLPHKVFV EIKSTQKDSK DPDTDLIVPN
Length:140
Mass (Da):15,600
Last modified:December 1, 2001 - v1
Checksum:i6144C5EEA68DB65A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596164 Genomic DNA. Translation: CAC95664.1.
PIRiAH1486.
RefSeqiWP_003760402.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC95664; CAC95664; CAC95664.
KEGGilin:lin0431.
PATRICi20297554. VBILisInn102668_0451.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596164 Genomic DNA. Translation: CAC95664.1.
PIRiAH1486.
RefSeqiWP_003760402.1. NC_003212.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KPPNMR-A36-140[»]
3LD7X-ray1.55A/B/C36-127[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272626.lin0431.

Protocols and materials databases

DNASUi1128874.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC95664; CAC95664; CAC95664.
KEGGilin:lin0431.
PATRICi20297554. VBILisInn102668_0451.

Phylogenomic databases

eggNOGiENOG4105R4C. Bacteria.
COG5341. LUCA.
HOGENOMiHOG000232258.
OMAiWISRIGQ.
OrthoDBiEOG6WQD8N.

Miscellaneous databases

EvolutionaryTraceiQ92EM7.

Family and domain databases

Gene3Di2.60.320.10. 1 hit.
InterProiIPR024045. NusG_dom2.
[Graphical view]
PfamiPF07009. NusG_II. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLIP 11262Imported.
  2. "Solution NMR structure of Lin0431 protein from Listeria innocua reveals high structural similarity with domain II of bacterial transcription antitermination protein NusG."
    Tang Y., Xiao R., Ciccosanti C., Janjua H., Lee D.Y., Everett J.K., Swapna G.V., Acton T.B., Rost B., Montelione G.T.
    Proteins 78:2563-2568(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 36-140.
  3. "Crystal structure of the Lin0431 protein from Listeria innocua."
    Vorobiev S., Chen Y., Lee D., Patel D.J., Ciccosanti C., Sahdev S., Acton T.B., Xiao R., Everett J.K., Montelione G.T., Hunt J.F., Tong L.
    Submitted (JAN-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 36-127.

Entry informationi

Entry nameiQ92EM7_LISIN
AccessioniPrimary (citable) accession number: Q92EM7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: March 16, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.