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Protein
Submitted name:

Lin1889 protein

Gene

lin1889

Organism
Listeria innocua serovar 6a (strain CLIP 11262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi29 – 291Magnesium; via tele nitrogenCombined sources
Metal bindingi58 – 581Magnesium; via tele nitrogenCombined sources
Metal bindingi59 – 591MagnesiumCombined sources
Metal bindingi123 – 1231MagnesiumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Lin1889 proteinImported
Gene namesi
Ordered Locus Names:lin1889Imported
OrganismiListeria innocua serovar 6a (strain CLIP 11262)Imported
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272626.lin1889.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3B57X-ray3.00A1-201[»]
ProteinModelPortaliQ92AN1.
SMRiQ92AN1. Positions 1-201.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ92AN1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 137116HDcInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105EST. Bacteria.
COG1418. LUCA.
HOGENOMiHOG000034252.
KOiK06950.
OMAiDSKFHNG.
OrthoDBiEOG63VC4M.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamiPF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92AN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKEEIILSA KNWMHSHFEN ETTGHDWSHI KRVWKLSKEI QSKEGGDLFT
60 70 80 90 100
IELAALFHDY SDIKLTTDEQ EATKTLINWM ETKEIPSELI KKIIRIIQSV
110 120 130 140 150
SFKKGKNTFK ALTIEEKIVQ DADRLDAIGA IGIARTFTYG GAHNREIANQ
160 170 180 190 200
NNPKNTTLQH FYDKLLLIKD QLNTETAKTI AKEKQKIMQD FIQALEKELK

V
Length:201
Mass (Da):23,227
Last modified:December 1, 2001 - v1
Checksum:iA886F352AE74591D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97119.1.
PIRiAG1668.
RefSeqiWP_003772443.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC97119; CAC97119; CAC97119.
KEGGilin:lin1889.
PATRICi20300589. VBILisInn102668_1933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97119.1.
PIRiAG1668.
RefSeqiWP_003772443.1. NC_003212.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3B57X-ray3.00A1-201[»]
ProteinModelPortaliQ92AN1.
SMRiQ92AN1. Positions 1-201.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272626.lin1889.

Protocols and materials databases

DNASUi1130577.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC97119; CAC97119; CAC97119.
KEGGilin:lin1889.
PATRICi20300589. VBILisInn102668_1933.

Phylogenomic databases

eggNOGiENOG4105EST. Bacteria.
COG1418. LUCA.
HOGENOMiHOG000034252.
KOiK06950.
OMAiDSKFHNG.
OrthoDBiEOG63VC4M.

Miscellaneous databases

EvolutionaryTraceiQ92AN1.

Family and domain databases

Gene3Di1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamiPF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00471. HDc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLIP 11262Imported.
  2. "Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua."
    Kuzin A.P., Abashidze M., Seetharaman J., Benach J., Forouhar F., Vorobiev S.M., Wang H., Janjua H., Cunningham K., Ma L-C., Xiao R., Liu J., Baran M.C., Acton T.B., Rost B., Montelione G.T., Tong L., Hunt J.F.
    Submitted (OCT-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS) IN COMPLEX WITH MAGNESIUM.

Entry informationi

Entry nameiQ92AN1_LISIN
AccessioniPrimary (citable) accession number: Q92AN1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: March 16, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.