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Protein
Submitted name:

Lin1909 protein

Gene

lin1909

Organism
Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi141 – 1411Manganese; via pros nitrogenCombined sources
Metal bindingi152 – 1521Manganese; via tele nitrogenCombined sources
Metal bindingi174 – 1741ManganeseCombined sources
Metal bindingi176 – 1761Manganese; via tele nitrogenCombined sources
Metal bindingi199 – 1991ManganeseCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ManganeseCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Lin1909 proteinImported
Gene namesi
Ordered Locus Names:lin1909Imported
OrganismiListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)Imported
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272626.lin1909.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FIJX-ray2.30A/B/C/D/E/F/G/H2-244[»]
ProteinModelPortaliQ92AL3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ92AL3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 244228Glutamine amidotransferase type-1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108Z86. Bacteria.
COG2071. LUCA.
HOGENOMiHOG000035714.
KOiK07010.
OMAiGFITACR.
OrthoDBiPOG091H076E.

Family and domain databases

Gene3Di3.40.50.880. 1 hit.
InterProiIPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR011697. Peptidase_C26.
[Graphical view]
PfamiPF07722. Peptidase_C26. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
PROSITEiPS51273. GATASE_TYPE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92AL3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPVIGITGN RLVKGVDVFY GHRVTYTQQR YVDAIQKVGG FPIALPIDDP
60 70 80 90 100
STAVQAISLV DGLLLTGGQD ITPQLYLEEP SQEIGAYFPP RDSYEIALVR
110 120 130 140 150
AALDAGKPIF AICRGMQLVN VALGGTLYQD ISQVETKALQ HLQRVDEQLG
160 170 180 190 200
SHTIDIEPTS ELAKHHPNKK LVNSLHHQFI KKLAPSFKVT ARTADGMIEA
210 220 230 240
VEGDNLPSWY LGVQWHPELM FQTDPESEQL FQALVDESKK TMVK
Length:244
Mass (Da):27,030
Last modified:December 1, 2001 - v1
Checksum:i34B525AB91F016E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97139.1.
PIRiAC1671.
RefSeqiWP_003762892.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC97139; CAC97139; CAC97139.
KEGGilin:lin1909.
PATRICi20300629. VBILisInn102668_1953.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97139.1.
PIRiAC1671.
RefSeqiWP_003762892.1. NC_003212.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FIJX-ray2.30A/B/C/D/E/F/G/H2-244[»]
ProteinModelPortaliQ92AL3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272626.lin1909.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC97139; CAC97139; CAC97139.
KEGGilin:lin1909.
PATRICi20300629. VBILisInn102668_1953.

Phylogenomic databases

eggNOGiENOG4108Z86. Bacteria.
COG2071. LUCA.
HOGENOMiHOG000035714.
KOiK07010.
OMAiGFITACR.
OrthoDBiPOG091H076E.

Miscellaneous databases

EvolutionaryTraceiQ92AL3.

Family and domain databases

Gene3Di3.40.50.880. 1 hit.
InterProiIPR029062. Class_I_gatase-like.
IPR017926. GATASE.
IPR011697. Peptidase_C26.
[Graphical view]
PfamiPF07722. Peptidase_C26. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
PROSITEiPS51273. GATASE_TYPE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ92AL3_LISIN
AccessioniPrimary (citable) accession number: Q92AL3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: September 7, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.