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Protein
Submitted name:

Lin2004 protein

Gene

lin2004

Organism
Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Lin2004 proteinImported
Gene namesi
Ordered Locus Names:lin2004Imported
OrganismiListeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)Imported
Taxonomic identifieri272626 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000002513 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272626.lin2004.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HUJX-ray1.74A1-121[»]
ProteinModelPortaliQ92AB8.
SMRiQ92AB8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ92AB8.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105UC8. Bacteria.
ENOG4111XHV. LUCA.
HOGENOMiHOG000040916.
OMAiDNIQMTA.
OrthoDBiPOG091H0WDZ.

Family and domain databases

Gene3Di1.20.120.440. 1 hit.
InterProiIPR014913. DUF1798.
IPR023351. YppE-like_dom.
[Graphical view]
PfamiPF08807. DUF1798. 1 hit.
[Graphical view]
SUPFAMiSSF140415. SSF140415. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92AB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELLIRTEQL LLQNEKNWEL YLSNREEEKP FDFYKDMKPF VDEAKRCADD
60 70 80 90 100
FLELAIPWVN TERPPYLGEL QLRQACDNVQ MTAVSAFNGR SFYKHFLDHY
110 120
QSTKYTLTRV RDFLKRKEES M
Length:121
Mass (Da):14,652
Last modified:December 1, 2001 - v1
Checksum:iBDB87DB51C4CEE77
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97234.1.
PIRiAB1683.
RefSeqiWP_003763059.1. NC_003212.1.

Genome annotation databases

EnsemblBacteriaiCAC97234; CAC97234; CAC97234.
KEGGilin:lin2004.
PATRICi20300819. VBILisInn102668_2048.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596170 Genomic DNA. Translation: CAC97234.1.
PIRiAB1683.
RefSeqiWP_003763059.1. NC_003212.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HUJX-ray1.74A1-121[»]
ProteinModelPortaliQ92AB8.
SMRiQ92AB8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272626.lin2004.

Protocols and materials databases

DNASUi1130706.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC97234; CAC97234; CAC97234.
KEGGilin:lin2004.
PATRICi20300819. VBILisInn102668_2048.

Phylogenomic databases

eggNOGiENOG4105UC8. Bacteria.
ENOG4111XHV. LUCA.
HOGENOMiHOG000040916.
OMAiDNIQMTA.
OrthoDBiPOG091H0WDZ.

Miscellaneous databases

EvolutionaryTraceiQ92AB8.

Family and domain databases

Gene3Di1.20.120.440. 1 hit.
InterProiIPR014913. DUF1798.
IPR023351. YppE-like_dom.
[Graphical view]
PfamiPF08807. DUF1798. 1 hit.
[Graphical view]
SUPFAMiSSF140415. SSF140415. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ92AB8_LISIN
AccessioniPrimary (citable) accession number: Q92AB8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.