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Q928K4 (DCEC_LISIN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable glutamate decarboxylase gamma

Short name=GAD-gamma
EC=4.1.1.15
Gene names
Ordered Locus Names:lin2528
OrganismListeria innocua serovar 6a (strain CLIP 11262) [Complete proteome] [HAMAP]
Taxonomic identifier272626 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-glutamate = 4-aminobutanoate + CO2.

Cofactor

Pyridoxal phosphate By similarity.

Sequence similarities

Belongs to the group II decarboxylase family.

Ontologies

Keywords
   LigandPyridoxal phosphate
   Molecular functionDecarboxylase
Lyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 467467Probable glutamate decarboxylase gamma
PRO_0000146991

Amino acid modifications

Modified residue2781N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q928K4 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 008AB18F6E274590

FASTA46753,690
        10         20         30         40         50         60 
MLYSENDKRK HESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ LMDEGNARQN 

        70         80         90        100        110        120 
LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR CVNILADLWN APKEMSYLGT 

       130        140        150        160        170        180 
STVGSSEACM LGGLAMKFRW RNNAEKRGLD IQAKRPNLII SSGYQVCWEK FCVYWDVDMR 

       190        200        210        220        230        240 
VVPMDKEHLS LDVEKVFELV DEYTIGIVGI LGITYTGKFD DIALLDEKVE AYNEANEHQL 

       250        260        270        280        290        300 
VIHIDGASGA MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 

       310        320        330        340        350        360 
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK TALYLSKTVE 

       370        380        390        400        410        420 
KSGYFEIIND GSNLPIVCYK LKDDLDVEWT LYDLADQLLM KGWQVPAYPL PADLSDTIIQ 

       430        440        450        460 
RFVCRADLGY NVAEEFAADF ADALHNLEHA RVLYHDKERN DSYGFTH 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL596172 Genomic DNA. Translation: CAC97755.1.
PIRAC1748.
RefSeqNP_471858.1. NC_003212.1.

3D structure databases

ProteinModelPortalQ928K4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272626.lin2528.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAC97755; CAC97755; CAC97755.
GeneID1131338.
KEGGlin:lin2528.
PATRIC20301953. VBILisInn102668_2590.

Organism-specific databases

GenoListLIN2528.
CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAPNLVMSS.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK876864.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameDCEC_LISIN
AccessionPrimary (citable) accession number: Q928K4
Entry history
Integrated into UniProtKB/Swiss-Prot: February 21, 2002
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families