Unreviewed, UniProtKB/TrEMBL Q928J2 (Q928J2_LISIN)

Names and origin

Protein names

Submitted name:
    Lin2540 protein EMBL CAC97767.1

Gene names

Ordered Locus Names:

lin2540

Organism

Listeria innocua [Complete proteome] [HAMAP]

Taxonomic identifier

1642 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	1090 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q928J2-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 5294EF5A0327ECBA	FASTA	1,090	121,745
	10 20 30 40 50 60 MKRKGRKSSL IFILTILIFS CLSGFGTNVF AMDGEYHSPY GDDDLYTVQP TERSPRDPKA 70 80 90 100 110 120 GEDVTLNITT WPIEDGQNVW VEWTKNGVAQ ENVTAAYDYN SGNNTYWKAD LGKFEKGDEI 130 140 150 160 170 180 TYTTKGSTDG GTEYESGPFT FYVTDWEYVQ DVSSVVDNGD SITLNMTATA GEFTPKLYLS 190 200 210 220 230 240 FEDLDTLRME LSPTGKETGH AGKTGYTVDD GADKVTVTTD DLRVEIQKSP YRMEVYQADG 250 260 270 280 290 300 TLLTSEYTTA NSLGWLTDGK NVINQYQNNF MTPSDEAFYG FGERYDTINQ RGKDVETYVY 310 320 330 340 350 360 NEYQDQAQTE RTYLAVPFFV SANKYGMFVN SDFHSQFQMA SKVEDKYSFI LDNDGDMTNM 370 380 390 400 410 420 LDYYVISGKD QNDIVNNYTD ITGKTTLLPK WAFGLWMSAN EWDRESDVST ALSNAKENEI 430 440 450 460 470 480 PATGFVLEQW SDEETYYIWN DATYTAKKNG EPFAYDDFTF NGKWTNPKAM VDSVHDAGMN 490 500 510 520 530 540 IVLWQVPVLK DDNTVYEQRD NDEDYMISQG YSADDGTGAP YRVPASQWFG NGILLDFTNK 550 560 570 580 590 600 DAVNWWTSQR EYLLTDVGID GFKTDGGEMV WGRDTTFSNG EKGQEMRNRY PTDYVSSYFD 610 620 630 640 650 660 FAKSINPEAV SFSRSGTSGA QKSGIYWSGD QTSTFDSFQA SVKAGLSAST SGVSYWAWDM 670 680 690 700 710 720 AGFTGNYPTA ELYKRATAMA AFAPIMQFHS EKSDPSPSEE RSPWNAVART GDETILPTFQ 730 740 750 760 770 780 KYLYTRMNLL PYIYTAAKDT ADNGKSMMRQ MAMDYPEDIN TRNLDEQYMF GDDLLVAPIV 790 800 810 820 830 840 QEGQTEKEVY LPEGEWIDIW NGGIHPGGET ISYYADVDTL PVFAKAGAII PMNMTDGYQL 850 860 870 880 890 900 GQNVGNDLKA YDNLTFRVYP SGNSEYSFYD DVNGGEMRDI SVSEDFANEK VTVNLPAMAD 910 920 930 940 950 960 ETTMQVFSTE PTSVTVAGAE VAKADTLDAF NEATSAYYYD TVQNLTYIKT AATDTTQAIV 970 980 990 1000 1010 1020 LNGVNHAPYE AEFGHLTNVS TASDHAGYTG TGFVAGFDEE KEAVEFDIDA VDGASDYTME 1030 1040 1050 1060 1070 1080 VRYSAGVEDA TRTVYVNGNK QQIALPKTAD WDTWDVVEVP VTLQDGINQV VFDFEAGDTA 1090 GINFDHVVIK

References

[1]

"Comparative genomics of Listeria species." Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E. , Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. Science 294:849-852(2001) [PubMed: 11679669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP 11262 / Serovar 6a.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL596172 Genomic DNA. Translation: CAC97767.1.
PIR	AG1749.
RefSeq	NP_471870.1.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	CBM35. Carbohydrate-Binding Module Family 35. GH31. Glycoside Hydrolase Family 31.
Genome annotation databases
GeneID	1131352.
GenomeReviews	Gene locus lin2540 in contig AL592022_GR.
KEGG	lin:lin2540.
NMPDR	fig|272626.1.peg.2523.
Organism-specific databases
ListiList	LIN2540.
CMR	Search...
Phylogenomic databases
HOGENOM	Q928J2.
OMA	Q928J2. MASKVED.
Enzyme and pathway databases
BioCyc	LINN272626:LIN2540-MON.
Family and domain databases
InterPro	IPR005084. CBM_6. IPR000322. Glyco_hydro_31. [Graphical view]
PANTHER	PTHR22762. Glyco_hydro_31. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF01055. Glyco_hydro_31. 1 hit. [Graphical view]
PROSITE	PS51175. CBM6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q928J2_LISIN

Accession

Primary (citable) accession number: Q928J2

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 5, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)