Q928C5 (Q928C5_LISIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lin2611 protein EMBL CAC97838.1

Gene names

Ordered Locus Names:

lin2611

Organism

Listeria innocua [Complete proteome] [HAMAP]

Taxonomic identifier

1642 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	478 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 2 fibronectin type-III domains. RuleBase RU000718

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro viral capsid Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q928C5 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 328BBE85A607FF85	FASTA	478	52,437
	10 20 30 40 50 60 MNKFSKIGMF FVVAILSVVL FETNASAHGY ISKPASRVYL ANQGINTGVG AAQYEPQSVE 70 80 90 100 110 120 APKGFPASGP VDGKIAGGGK YSLLDAQTQD RWAKVDVESG PLTVEWTLTA PHRTSSWDYF 130 140 150 160 170 180 ITKKGWDPNK PLTRADFEPL ATITADGSVP DRLSKQEITI PNDRSGYYVI LGVWSIADTG 190 200 210 220 230 240 NAFYQVIDAN IINSDIEPVL DNEAPTEPTN LTGTTTAKKV SLTWTASKDN VGIKGYEILR 250 260 270 280 290 300 DGKVIGESQV AAYEDTTVKD NTTYTYTVRA KDFSGNTSSL SNSAKLTTKE APAVDNEAPT 310 320 330 340 350 360 APKGLMSHAQ TDTTIALCWQ ASTDNVEVKN YELYRNNTKI ATTTSTMFED TKLASDTSYS 370 380 390 400 410 420 YKVYAVDTSG NRSLVSNEIT AKTKPLDPMN TWKADRIYNA GDQIYYNGIA YTAKWWTKGN 430 440 450 460 470 APDTSDVWKS NSTELPVWNT QKAYNGGEKV SYNGKIYQAK WWVRGEKPDS SSIWIVVN

References

[1]

"Comparative genomics of Listeria species." Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E. , Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. Science 294:849-852(2001) [PubMed: 11679669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP 11262 / Serovar 6a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL596173 Genomic DNA. Translation: CAC97838.1.
PIR	AF1758.
RefSeq	NP_471941.1. NC_003212.1.
3D structure databases
HSSP	HSSP built from PDB template 1K85 based on UniProtKB P20533.
ProteinModelPortal	Q928C5.
SMR	Q928C5. Positions 28-191.
ModBase	Search...
Protein family/group databases
CAZy	CBM33. Carbohydrate-Binding Module Family 33. CBM5. Carbohydrate-Binding Module Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1131440.
GenomeReviews	Gene locus lin2611 in contig AL592022_GR.
KEGG	lin:lin2611.
NMPDR	fig|272626.1.peg.2594.
PATRIC	20302139. VBILisInn102668_2682.
Organism-specific databases
GenoList	LIN2611.
CMR	Search...
Phylogenomic databases
HOGENOM	HBG757921.
OMA	AVDNEAP.
ProtClustDB	CLSK2484877.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR004302. Chitin-bd_3. IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KO	K03933.
Pfam	PF02839. CBM_5_12. 2 hits. PF03067. Chitin_bind_3. 1 hit. PF00041. fn3. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 2 hits. SM00060. FN3. 2 hits. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 2 hits. SSF49265. FN_III-like. 2 hits. SSF81296. Ig_E-set. 1 hit.
PROSITE	PS50853. FN3. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q928C5_LISIN

Accession

Primary (citable) accession number: Q928C5

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	December 14, 2011
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)