Reviewed, UniProtKB/Swiss-Prot Q928C2 (NAMA_LISIN)

Names and origin

Protein names

Recommended name:
    NADPH dehydrogenase
    EC=1.6.99.1
Alternative name(s):
    Xenobiotic reductase

Gene names

Name:	namA
Ordered Locus Names:	lin2614

Organism

Listeria innocua [Complete proteome] [HAMAP]

Taxonomic identifier

1642 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	338 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes By similarity.
Catalytic activity	NADPH + acceptor = NADP+ + reduced acceptor. HAMAP MF_01614
Cofactor	FMN By similarity.
Subunit structure	Homotetramer By similarity.
Sequence similarities	Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily.

Ontologies

Keywords
Ligand	FMN Flavoprotein NADP
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	FMN binding Inferred from electronic annotation. Source: InterPro NADPH dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 338	338	NADPH dehydrogenase HAMAP MF_01614		PRO_0000216122
Regions
	Nucleotide binding	22 – 26	5	FMN By similarity
Sites
	Binding site	27	1	Substrate By similarity
	Binding site	163	1	Substrate By similarity
	Binding site	166	1	Substrate By similarity
	Binding site	214	1	FMN By similarity
	Binding site	307	1	FMN By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q928C2-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 491FECA770CA6C48	FASTA	338	37,120
	10 20 30 40 50 60 MSKLFSEYKL KDVTLKNRIV MSPMCMYSVE NKDGIATDFH FAHYVSRAAG GTGLVILEAT 70 80 90 100 110 120 AVQEVGRISE FDLGLWNDEQ VPALKRLVDG LHYHGAKAGI QLAHAGRKAV LPGEIVAPSA 130 140 150 160 170 180 IPFDEKSAKP VELTKEAIKE VVADFKRAAY RAKEAGFDVI EIHAAHGYLI HQFLSPISNR 190 200 210 220 230 240 REDNYGGPAG NRYKILSDII KAVKEVWDGP IIVRVSATDY AHGGLQLEDH IPFAKWMKAD 250 260 270 280 290 300 GVELIDVSTG GLVNVEPPVF PGYQVPFADE IRRGAGIATG ALGLITRGEQ AEEILCNERA 310 320 330 DLIIIGRELL RNPYFAKEAA ETLGETIEAP KQYSRAWK

References

[1]

"Comparative genomics of Listeria species." Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F., Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A., Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E., Dominguez-Bernal G., Duchaud E. , Durant L., Dussurget O., Entian K.-D., Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W., Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U., Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A., Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B., Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N., Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P. Science 294:849-852(2001) [PubMed: 11679669] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP 11262 / Serovar 6a.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL596173 Genomic DNA. Translation: CAC97841.1.
PIR	AI1758.
RefSeq	NP_471944.1.
3D structure databases
HSSP	HSSP built from PDB template 1ICQ based on UniProtKB Q9XG54.
ModBase	Search...
Genome annotation databases
GeneID	1131443.
GenomeReviews	Gene locus lin2614 in contig AL592022_GR.
KEGG	lin:lin2614.
NMPDR	fig|272626.1.peg.2597.
Organism-specific databases
ListiList	LIN2614.
CMR	Search...
Phylogenomic databases
HOGENOM	Q928C2.
OMA	Q928C2. WVEDGWN.
Enzyme and pathway databases
BioCyc	LINN272626:LIN2614-MON.
BRENDA	1.6.99.1. 270396.
Family and domain databases
HAMAP	MF_01614. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR001155. OxRdtase_FMN_N. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
Pfam	PF00724. Oxidored_FMN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NAMA_LISIN

Accession

Primary (citable) accession number: Q928C2

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 21, 2005
Last sequence update:	December 1, 2001
Last modified:	June 16, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)