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Q927K7 (RL3_LISIN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
50S ribosomal protein L3
Gene names
Name:rplC
Ordered Locus Names:lin2781
OrganismListeria innocua serovar 6a (strain CLIP 11262) [Complete proteome] [HAMAP]
Taxonomic identifier272626 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria ›

Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01325

Subunit structure

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.

Sequence similarities

Belongs to the ribosomal protein L3P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 20920950S ribosomal protein L3 HAMAP-Rule MF_01325
PRO_0000077114

Sequences

Sequence LengthMass (Da)Tools
Q927K7 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: B4B6DFB83488EFA5

FASTA20922,841
        10         20         30         40         50         60 
MTKGILGRKV GMTQVFTENG ELIPVTVIEA AQNVVLQKKT VETDGYEAVQ IGFEDKRAKL 

        70         80         90        100        110        120 
SNKPEQGHVA KADTTPKRFI REFRDVNLDE YEIGAEVKVD VFAEGDIIDA TGVSKGKGFQ 

       130        140        150        160        170        180 
GVIKRHGQSR GPMAHGSRYH RRPGSMGPVA PNRVFKNKLL PGRMGGEQIT IQNLEIVKVD 

       190        200 
VEKNVLLVKG NVPGAKKALV QIKTATKAK

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL596173 Genomic DNA. Translation: CAC98007.1.
PIRAG1779.
RefSeqNP_472110.1. NC_003212.1.

3D structure databases

ProteinModelPortalQ927K7.
ModBaseSearch...

Protein-protein interaction databases

STRING272626.lin2781.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAC98007; CAC98007; CAC98007.
GeneID1131642.
KEGGlin:lin2781.
PATRIC20302497. VBILisInn102668_2854.

Organism-specific databases

GenoListLIN2781.
CMRSearch...

Phylogenomic databases

eggNOGCOG0087.
HOGENOMHOG000100368.
KOK02906.
OMAKGMRMAG.
ProtClustDBPRK00001.

Family and domain databases

HAMAPMF_01325_B. Ribosomal_L3_B.
InterProIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PANTHERPTHR11229. PTHR11229. 1 hit.
PfamPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMSSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR03625. L3_bact. 1 hit.
PROSITEPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL3_LISIN
AccessionPrimary (citable) accession number: Q927K7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 16, 2004
Last sequence update: December 1, 2001
Last modified: May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

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