Q92736 (RYR2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 145.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ryanodine receptor 2 Short name=RYR-2 Short name=RyR2 Short name=hRYR-2 Alternative name(s): Cardiac muscle ryanodine receptor Cardiac muscle ryanodine receptor-calcium release channel Type 2 ryanodine receptor | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 4967 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Calcium channel that mediates the release of Ca2+ from the sarcoplasmic reticulum into the cytoplasm and thereby plays a key role in triggering cardiac muscle contraction. Aberrant channel activation can lead to cardiac arrhythmia. In cardiac myocytes, calcium release is triggered by increased Ca2+ levels due to activation of the L-type calcium channel CACNA1C. The calcium channel activity is modulated by formation of heterotetramers with RYR3. Required for cellular calcium ion homeostasis. Required for embryonic heart development. Ref.6 Ref.8 |
| Subunit structure | Homotetramer. Can also form heterotetramers with RYR1 and RYR3 By similarity. Interacts with FKBP1A and FKBP1B; these interactions may stabilize the channel in its closed state and prevent Ca2+ leaks. Interacts with CALM and S100A1; these interactions regulate channel activity. Identified in a complex composed of RYR2, FKBP1B, PKA catalytic subunit, PRKAR2A, AKAP6, and the protein phosphatases PP2A and PP1. Interacts directly with FKBP1B, PKA, PP1 and PP2A. Ref.6 Ref.7 |
| Subcellular location | Sarcoplasmic reticulum membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein Probable. Note: The number of predicted transmembrane domains varies between orthologs, but both N-terminus and C-terminus seem to be cytoplasmic By similarity. Ref.6 |
| Tissue specificity | Detected in heart muscle (at protein level). Heart muscle, brain (cerebellum and hippocampus) and placenta. Ref.5 Ref.6 |
| Developmental stage | Expressed in myometrium during pregnancy. Ref.4 |
| Induction | By TGFB1. Ref.4 |
| Domain | The calcium release channel activity resides in the C-terminal region while the remaining part of the protein resides in the cytoplasm Probable. |
| Post-translational modification | Channel activity is modulated by phosphorylation. Phosphorylation at Ser-2808 and Ser-2814 increases the open probability of the calcium channel. Phosphorylation is increased in failing heart, leading to calcium leaks and increased cytoplasmic Ca2+ levels. |
| Involvement in disease | Familial arrhythmogenic right ventricular dysplasia 2 (ARVD2) [MIM:600996]: A congenital heart disease characterized by infiltration of adipose and fibrous tissue into the right ventricle and loss of myocardial cells, resulting in ventricular and supraventricular arrhythmias. Ventricular tachycardia, catecholaminergic polymorphic 1, with or without atrial dysfunction and/or dilated cardiomyopathy (CPVT1) [MIM:604772]: An arrhythmogenic disorder characterized by stress-induced, bidirectional ventricular tachycardia that may degenerate into cardiac arrest and cause sudden death. Patients present with recurrent syncope, seizures, or sudden death after physical activity or emotional stress. |
| Miscellaneous | Channel activity is modulated by the alkaloid ryanodine that binds to the open Ca-release channel with high affinity. At low concentrations, ryanodine maintains the channel in an open conformation. High ryanodine concentrations inhibit channel activity. Channel activity is regulated by calmodulin (CALM). The calcium release is activated by increased cytoplasmic calcium levels, by nitric oxyde (NO), caffeine and ATP. Channel activity is inhibited by magnesium ions, possibly by competition for calcium binding sites By similarity. |
| Sequence similarities | Belongs to the ryanodine receptor (TC 1.A.3.1) family. RYR2 subfamily. [View classification] Contains 3 B30.2/SPRY domains. Contains 5 MIR domains. |
| Sequence caution | The sequence CAH71369.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAH71393.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAH73918.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI14440.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI15350.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI15936.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI22065.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| MDM2 | Q00987 | 2 | EBI-1170425,EBI-389668 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q92736-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q92736-2) The sequence of this isoform differs from the canonical sequence as follows: 3715-3715: E → EVTGSQRSK |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 4967 | 4967 | Ryanodine receptor 2 | PRO_0000219361 | |||||
Regions | |||||||||
| Topological domain | 1 – 4281 | 4281 | Cytoplasmic Potential | ||||||
| Transmembrane | 4282 – 4302 | 21 | Helical; Potential | ||||||
| Transmembrane | 4504 – 4524 | 21 | Helical; Potential | ||||||
| Transmembrane | 4580 – 4600 | 21 | Helical; Potential | ||||||
| Transmembrane | 4730 – 4750 | 21 | Helical; Potential | ||||||
| Transmembrane | 4769 – 4789 | 21 | Helical; Potential | ||||||
| Intramembrane | 4820 – 4829 | 10 | Pore-forming; By similarity | ||||||
| Transmembrane | 4850 – 4870 | 21 | Helical; Potential | ||||||
| Topological domain | 4871 – 4967 | 97 | Cytoplasmic Potential | ||||||
| Domain | 110 – 165 | 56 | MIR 1 | ||||||
| Domain | 172 – 217 | 46 | MIR 2 | ||||||
| Domain | 225 – 280 | 56 | MIR 3 | ||||||
| Domain | 286 – 343 | 58 | MIR 4 | ||||||
| Domain | 351 – 408 | 58 | MIR 5 | ||||||
| Domain | 599 – 809 | 211 | B30.2/SPRY 1 | ||||||
| Repeat | 853 – 966 | 114 | 1 | ||||||
| Repeat | 967 – 1080 | 114 | 2 | ||||||
| Domain | 1025 – 1222 | 198 | B30.2/SPRY 2 | ||||||
| Domain | 1337 – 1562 | 226 | B30.2/SPRY 3 | ||||||
| Repeat | 2692 – 2810 | 119 | 3 | ||||||
| Repeat | 2812 – 2925 | 114 | 4 | ||||||
| Region | 853 – 2925 | 2073 | 4 X approximate repeats | ||||||
| Region | 3581 – 3610 | 30 | Interaction with CALM | ||||||
| Coiled coil | 4412 – 4445 | 34 | Potential | ||||||
| Compositional bias | 4414 – 4455 | 42 | Glu-rich (acidic) | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2808 | 1 | Phosphoserine; by CaMK2D and PKA Ref.6 Ref.8 | ||||||
| Modified residue | 2814 | 1 | Phosphoserine; by CaMK2D Ref.8 | ||||||
Natural variations | |||||||||
| Alternative sequence | 3715 | 1 | E → EVTGSQRSK in isoform 2. | VSP_005953 | |||||
| Natural variant | 164 | 1 | P → S in CPVT1. Ref.18 | VAR_044086 | |||||
| Natural variant | 176 | 1 | R → Q in ARVD2 and CPVT1. Ref.2 Ref.16 | VAR_044087 | |||||
| Natural variant | 414 | 1 | R → L in CPVT1. Ref.18 | VAR_044088 | |||||
| Natural variant | 419 | 1 | I → F in CPVT1. Ref.18 | VAR_044089 | |||||
| Natural variant | 420 | 1 | R → W in CPVT1. Ref.16 Ref.21 | VAR_044090 | |||||
| Natural variant | 433 | 1 | L → P in ARVD2 and CPVT1. Ref.2 Ref.16 | VAR_011395 | |||||
| Natural variant | 507 | 1 | V → I. Corresponds to variant rs16835270 [ dbSNP | Ensembl ]. | VAR_044091 | |||||
| Natural variant | 1886 | 1 | G → S. Corresponds to variant rs3766871 [ dbSNP | Ensembl ]. | VAR_022078 | |||||
| Natural variant | 2246 | 1 | S → L in CPVT1. Ref.13 Ref.15 Ref.21 | VAR_011396 | |||||
| Natural variant | 2306 | 1 | V → I in CPVT1. Ref.17 | VAR_023694 | |||||
| Natural variant | 2311 | 1 | E → D in CPVT1. Ref.15 | VAR_044092 | |||||
| Natural variant | 2328 | 1 | P → S in CPVT1. Ref.14 | VAR_011397 | |||||
| Natural variant | 2386 | 1 | N → I in ARVD2 and CPVT1. Ref.2 Ref.16 | VAR_011398 | |||||
| Natural variant | 2387 | 1 | A → P in CPVT1. Ref.20 | VAR_044093 | |||||
| Natural variant | 2392 | 1 | Y → C in CPVT1. Ref.16 | VAR_044094 | |||||
| Natural variant | 2403 | 1 | A → T in CPVT1. Ref.18 | VAR_044095 | |||||
| Natural variant | 2474 | 1 | R → S in CPVT1. Ref.13 Ref.15 | VAR_011399 | |||||
| Natural variant | 2504 | 1 | T → M in ARVD2 and CPVT1. Ref.2 Ref.16 | VAR_044096 | |||||
| Natural variant | 2958 | 1 | Q → R. Ref.14 Corresponds to variant rs34967813 [ dbSNP | Ensembl ]. | VAR_011590 | |||||
| Natural variant | 3778 | 1 | L → F in CPVT1. Ref.15 | VAR_044097 | |||||
| Natural variant | 3946 | 1 | G → S in CPVT1. Ref.15 | VAR_044098 | |||||
| Natural variant | 4097 | 1 | N → S in CPVT1. Ref.21 | VAR_044099 | |||||
| Natural variant | 4104 | 1 | N → K in CPVT1. Ref.13 Ref.15 | VAR_011400 | |||||
| Natural variant | 4146 | 1 | E → K in CPVT1. Ref.21 | VAR_044100 | |||||
| Natural variant | 4158 | 1 | T → P in CPVT1. Ref.21 | VAR_044101 | |||||
| Natural variant | 4201 | 1 | Q → R in CPVT1. Ref.14 | VAR_011401 | |||||
| Natural variant | 4497 | 1 | R → C in CPVT1. Ref.13 Ref.15 Ref.21 | VAR_011402 | |||||
| Natural variant | 4499 | 1 | F → C in CPVT1. Ref.18 | VAR_044102 | |||||
| Natural variant | 4504 | 1 | M → I in CPVT1. Ref.19 | VAR_044103 | |||||
| Natural variant | 4510 | 1 | A → T in CPVT1. Ref.18 | VAR_044104 | |||||
| Natural variant | 4607 | 1 | A → P in CPVT1. Ref.20 | VAR_044105 | |||||
| Natural variant | 4653 | 1 | V → F in CPVT1. Ref.14 | VAR_011403 | |||||
| Natural variant | 4671 | 1 | G → R in CPVT1. Ref.18 | VAR_044106 | |||||
| Natural variant | 4771 | 1 | V → I in CPVT1. Ref.15 | VAR_044107 | |||||
| Natural variant | 4848 | 1 | I → V in CPVT1. Ref.18 | VAR_044108 | |||||
| Natural variant | 4860 | 1 | A → G in CPVT1; diminishes the response to activation by luminal Ca(2+) but has little effect on the sensitivity of the channel to activation by cytosolic Ca(2+); shows caffeine-induced Ca(2+) release but exhibits no store-overload-induced Ca(2+) release (SOICR); HL1 cardiac cells transfected with the G-4860 mutant displayed attenuated SOICR activity compared to cells transfected with wild-type RYR2. Ref.15 Ref.22 | VAR_044109 | |||||
| Natural variant | 4867 | 1 | I → M in CPVT1. Ref.15 | VAR_044110 | |||||
| Natural variant | 4880 | 1 | V → A in CPVT1. Ref.19 | VAR_044111 | |||||
| Natural variant | 4895 | 1 | N → D in CPVT1. Ref.15 | VAR_044112 | |||||
| Natural variant | 4902 | 1 | P → L in CPVT1. Ref.17 | VAR_023695 | |||||
| Natural variant | 4950 | 1 | E → K in CPVT1. Ref.15 | VAR_044113 | |||||
| Natural variant | 4959 | 1 | R → Q in CPVT1. Ref.17 | VAR_023696 | |||||
Experimental info | |||||||||
| Mutagenesis | 2808 | 1 | S → A: Abolishes phosphorylation by PKA. Ref.6 | ||||||
| Sequence conflict | 1037 | 1 | L → P in CAA66975. Ref.1 | ||||||
| Sequence conflict | 1037 | 1 | L → P in CAC18855. Ref.2 | ||||||
| Sequence conflict | 2785 – 2789 | 5 | WGWRI → RTMRT in CAA66975. Ref.1 | ||||||
| Sequence conflict | 2785 – 2789 | 5 | WGWRI → RTMRT in CAC18855. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The human cardiac muscle ryanodine receptor-calcium release channel: identification, primary structure and topological analysis." Tunwell R.E.A., Wickenden C., Bertrand B.M.A., Shevchenko V.I., Walsh M.B., Allen P.D., Lai F.A. Biochem. J. 318:477-487(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], ALTERNATIVE SPLICING. Tissue: Heart muscle. |
| [2] | "Identification of mutations in the cardiac ryanodine receptor gene in families affected with arrhythmogenic right ventricular cardiomyopathy type 2 (ARVD2)." Tiso N., Stephan D.A., Nava A., Bagattin A., Devaney J.M., Stanchi F., Larderet G., Brahmbhatt B., Brown K., Bauce B., Muriago M., Basso C., Thiene G., Danieli G.A., Rampazzo A. Hum. Mol. Genet. 10:189-194(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS ARVD2 GLN-176; PRO-433; ILE-2386 AND MET-2504. |
| [3] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "Differential expression of ryanodine receptor RyR2 mRNA in the non-pregnant and pregnant human myometrium." Awad S.S., Lamb H.K., Morgan J.M., Dunlop W., Gillespie J.I. Biochem. J. 322:777-783(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 9-87 AND 533-681, DEVELOPMENTAL STAGE, INDUCTION BY TGFB1. Tissue: Heart muscle and Myometrium. |
| [5] | "Partial cloning and differential expression of ryanodine receptor/calcium-release channel genes in human tissues including the hippocampus and cerebellum." Martin C., Chapman K.E., Seckl J.R., Ashley R.H. Neuroscience 85:205-216(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 4292-4479, TISSUE SPECIFICITY. Tissue: Cerebellum and Hippocampus. |
| [6] | "PKA phosphorylation dissociates FKBP12.6 from the calcium release channel (ryanodine receptor): defective regulation in failing hearts." Marx S.O., Reiken S., Hisamatsu Y., Jayaraman T., Burkhoff D., Rosemblit N., Marks A.R. Cell 101:365-376(2000) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, IDENTIFICATION IN A COMPLEX WITH FKBP1B; PP1; PP2A AKAP6 AND PKA, INTERACTION WITH FKBP1B; PKA; PP1 AND PP2A, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, MUTAGENESIS OF SER-2808, PHOSPHORYLATION AT SER-2808. |
| [7] | "S100A1 and calmodulin compete for the same binding site on ryanodine receptor." Wright N.T., Prosser B.L., Varney K.M., Zimmer D.B., Schneider M.F., Weber D.J. J. Biol. Chem. 283:26676-26683(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH CALM AND S100A1. |
| [8] | "CaMKII-dependent diastolic SR Ca2+ leak and elevated diastolic Ca2+ levels in right atrial myocardium of patients with atrial fibrillation." Neef S., Dybkova N., Sossalla S., Ort K.R., Fluschnik N., Neumann K., Seipelt R., Schondube F.A., Hasenfuss G., Maier L.S. Circ. Res. 106:1134-1144(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, PHOSPHORYLATION AT SER-2808 AND SER-2814. |
| [9] | "Cardiac excitation-contraction coupling." Bers D.M. Nature 415:198-205(2002) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [10] | "Cardiac ryanodine receptor phosphorylation by CaM Kinase II: keeping the balance right." Currie S. Front. Biosci. 14:5134-5156(2009) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [11] | "Modulation of ryanodine receptor Ca2+ channels." Ozawa T. Mol. Med. Report. 3:199-204(2010) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [12] | "Ryanodine receptors: structure, expression, molecular details, and function in calcium release." Lanner J.T., Georgiou D.K., Joshi A.D., Hamilton S.L. Cold Spring Harb. Perspect. Biol. 2:E3996-E3996(2010) [PubMed] [Europe PMC] [Abstract] Cited for: REVIEW. |
| [13] | "Mutations in the cardiac ryanodine receptor gene (hRyR2) underlie catecholaminergic polymorphic ventricular tachycardia." Priori S.G., Napolitano C., Tiso N., Memmi M., Vignati G., Bloise R., Sorrentino V.V., Danieli G.A. Circulation 103:196-200(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS VTSIP LEU-2246; SER-2474; LYS-4104 AND CYS-4497. |
| [14] | "Mutations of the cardiac ryanodine receptor (RyR2) gene in familial polymorphic ventricular tachycardia." Laitinen P.J., Brown K.M., Piippo K., Swan H., Devaney J.M., Brahmbhatt B., Donarum E.A., Marino M., Tiso N., Viitasalo M., Toivonen L., Stephan D.A., Kontula K. Circulation 103:485-490(2001) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 SER-2328; ARG-4201 AND PHE-4653, VARIANT ARG-2958. |
| [15] | "Clinical and molecular characterization of patients with catecholaminergic polymorphic ventricular tachycardia." Priori S.G., Napolitano C., Memmi M., Colombi B., Drago F., Gasparini M., DeSimone L., Coltorti F., Bloise R., Keegan R., Cruz Filho F.E.S., Vignati G., Benatar A., DeLogu A. Circulation 106:69-74(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 LEU-2246; ASP-2311; SER-2474; PHE-3778; SER-3946; SER-3946; LYS-4104; CYS-4497; ILE-4771; GLY-4860; MET-4867; ASP-4895 AND LYS-4950. |
| [16] | "Screening for ryanodine receptor type 2 mutations in families with effort-induced polymorphic ventricular arrhythmias and sudden death: early diagnosis of asymptomatic carriers." Bauce B., Rampazzo A., Basso C., Bagattin A., Daliento L., Tiso N., Turrini P., Thiene G., Danieli G.A., Nava A. J. Am. Coll. Cardiol. 40:341-349(2002) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 GLN-176; TRP-420; PRO-433; ILE-2386; CYS-2392 AND MET-2504. |
| [17] | "Molecular genetics of exercise-induced polymorphic ventricular tachycardia: identification of three novel cardiac ryanodine receptor mutations and two common calsequestrin 2 amino-acid polymorphisms." Laitinen P.J., Swan H., Kontula K. Eur. J. Hum. Genet. 11:888-891(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS VTSIP ILE-2306; LEU-4902 AND GLN-4959. |
| [18] | "Spectrum and frequency of cardiac channel defects in swimming-triggered arrhythmia syndromes." Choi G., Kopplin L.J., Tester D.J., Will M.L., Haglund C.M., Ackerman M.J. Circulation 110:2119-2124(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 SER-164; LEU-414; PHE-419; THR-2403; CYS-4499; THR-4510; ARG-4671 AND VAL-4848. |
| [19] | "Gene symbol: RYR2. Disease: effort-induced polymorphic ventricular arrhythmias." Bagattin A., Veronese C., Rampazzo A., Danieli G.A. Hum. Genet. 114:404-404(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 ILE-4504 AND ALA-4880. |
| [20] | "Gene symbol: RYR2. Disease: effort-induced polymorphic ventricular arrhythmias." Bagattin A., Veronese C., Rampazzo A., Danieli G.A. Hum. Genet. 114:405-405(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 PRO-2387 AND PRO-4607. |
| [21] | "Targeted mutational analysis of the RyR2-encoded cardiac ryanodine receptor in sudden unexplained death: a molecular autopsy of 49 medical examiner/coroner's cases." Tester D.J., Spoon D.B., Valdivia H.H., Makielski J.C., Ackerman M.J. Mayo Clin. Proc. 79:1380-1384(2004) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS CPVT1 TRP-420; LEU-2246; SER-4097; LYS-4146; PRO-4158 AND CYS-4497. |
| [22] | "Loss of luminal Ca(2+) activation in the cardiac ryanodine receptor is associated with ventricular fibrillation and sudden death." Jiang D., Chen W., Wang R., Zhang L., Chen S.R.W. Proc. Natl. Acad. Sci. U.S.A. 104:18309-18314(2007) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION OF VARIANT CPVT1 GLY-4860. |
| + | Additional computationally mapped references. |
Web resources
| GeneReviews |
| Wikipedia Ryanodine receptor entry |
| Wikipedia RYR2 entry |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | X98330 mRNA. Translation: CAA66975.1. AJ300340 AJ300344 Genomic DNA. Translation: CAC18855.1.AL365332 AL513130 Genomic DNA. Translation: CAH71369.1. Sequence problems.AL445473 AL513130 Genomic DNA. Translation: CAH71393.1. Sequence problems.AL356773 AL513130 Genomic DNA. Translation: CAH73918.1. Sequence problems.AL391809 AL513130 Genomic DNA. Translation: CAI14440.1. Sequence problems.AL442065 AL513130 Genomic DNA. Translation: CAI15350.1. Sequence problems.AL513130 AL445473 Genomic DNA. Translation: CAI15936.1. Sequence problems.AL359924 AL513130 Genomic DNA. Translation: CAI22065.1. Sequence problems.Y08218 mRNA. Translation: CAA69395.1. X91869 mRNA. Translation: CAA62975.1. AJ002511 mRNA. Translation: CAA05502.1. |
| IPI | IPI00023217. IPI00218501. |
| PIR | S72269. |
| RefSeq | NP_001026.2. NM_001035.2. |
| UniGene | Hs.109514. Hs.738571. |
3D structure databases | |
| ProteinModelPortal | Q92736. |
| SMR | Q92736. Positions 12-379, 862-1068, 1082-1218, 2701-2905, 3581-3607, 4030-4086. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-38325N. |
| IntAct | Q92736. 5 interactions. |
| MINT | MINT-1201008. |
| STRING | 9606.ENSP00000355533. |
Protein family/group databases | |
| TCDB | 1.A.3.1.1. ryanodine-inositol 1,4,5-triphosphate receptor Ca2+ channel (RIR-CaC) family. |
PTM databases | |
| PhosphoSite | Q92736. |
Polymorphism databases | |
| DMDM | 308153558. |
Proteomic databases | |
| PaxDb | Q92736. |
| PRIDE | Q92736. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000366574; ENSP00000355533; ENSG00000198626. |
| GeneID | 6262. |
| KEGG | hsa:6262. |
| UCSC | uc001hyl.1. human. |
Organism-specific databases | |
| CTD | 6262. |
| GeneCards | GC01P237205. |
| HGNC | HGNC:10484. RYR2. |
| HPA | CAB006834. HPA016697. HPA020028. |
| MIM | 180902. gene. 600996. phenotype. 604772. phenotype. |
| neXtProt | NX_Q92736. |
| Orphanet | 3286. Catecholaminergic polymorphic ventricular tachycardia. 293899. Familial isolated arrhythmogenic ventricular dysplasia, biventricular form. 293888. Familial isolated arrhythmogenic ventricular dysplasia, left dominant form. 293910. Familial isolated arrhythmogenic ventricular dysplasia, right dominant form. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG247670. |
| HOGENOM | HOG000231428. |
| HOVERGEN | HBG006699. |
| InParanoid | Q92736. |
| KO | K04962. |
| OrthoDB | EOG4548XN. |
Gene expression databases | |
| ArrayExpress | Q92736. |
| Bgee | Q92736. |
| CleanEx | HS_RYR2. |
| Genevestigator | Q92736. |
| GermOnline | ENSG00000198626. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.238.10. 1 hit. |
| InterPro | IPR001870. B30.2/SPRY. IPR000699. Ca-rel_channel. IPR008985. ConA-like_lec_gl_sf. IPR011992. EF-hand-like_dom. IPR002048. EF_hand_dom. IPR014821. Ins145_P3_rcpt. IPR005821. Ion_trans_dom. IPR016093. MIR_motif. IPR013662. RIH_assoc-dom. IPR013333. Ryan_recept. IPR003032. Ryanodine_rcpt. IPR015925. Ryanodine_recept-rel. IPR009460. Ryanrecept_TM4-6. IPR018355. SPla/RYanodine_receptor_subgr. IPR003877. SPRY_rcpt. [Graphical view] |
| PANTHER | PTHR13715. PTHR13715. 1 hit. |
| Pfam | PF08709. Ins145_P3_rec. 1 hit. PF00520. Ion_trans. 1 hit. PF02815. MIR. 1 hit. PF08454. RIH_assoc. 1 hit. PF06459. RR_TM4-6. 1 hit. PF01365. RYDR_ITPR. 2 hits. PF02026. RyR. 4 hits. PF00622. SPRY. 3 hits. [Graphical view] |
| PRINTS | PR00795. RYANODINER. |
| SMART | SM00054. EFh. 2 hits. SM00472. MIR. 4 hits. SM00449. SPRY. 3 hits. [Graphical view] |
| SUPFAM | SSF49899. ConA_like_lec_gl. 2 hits. SSF82109. MIR. 1 hit. |
| PROSITE | PS50188. B302_SPRY. 3 hits. PS50919. MIR. 5 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChEMBL | CHEMBL4403. |
| ChiTaRS | RYR2. human. |
| GenomeRNAi | 6262. |
| NextBio | 24325. |
| SOURCE | Search... |
Entry information
| Entry name | RYR2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q92736 Secondary accession number(s): Q15411, Q546N8, Q5T3P2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
