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Protein
Submitted name:

Integrin alpha 6 subchain

Gene

Itga6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • laminin binding Source: RGD
  • protein complex binding Source: RGD

GO - Biological processi

  • cellular response to organic cyclic compound Source: RGD
  • integrin-mediated signaling pathway Source: UniProtKB-KW
  • positive regulation of cell-substrate adhesion Source: RGD
  • single organismal cell-cell adhesion Source: RGD

Keywordsi

Molecular functionIntegrinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Integrin alpha 6 subchainImported
Gene namesi
Name:Itga6Imported
Synonyms:inta6Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621633. Itga6.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500431855324 – 99Sequence analysisAdd BLAST76

Proteomic databases

PaxDbiQ924W3.

Interactioni

GO - Molecular functioni

  • laminin binding Source: RGD
  • protein complex binding Source: RGD

Protein-protein interaction databases

IntActiQ924W3. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliQ924W3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati30 – 95FG-GAPPROSITE-ProRule annotationAdd BLAST66

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3637. Eukaryota.
ENOG410XPVZ. LUCA.
HOGENOMiHOG000015786.
KOiK06485.

Family and domain databases

InterProiView protein in InterPro
IPR013519. Int_alpha_beta-p.
PROSITEiView protein in PROSITE
PS51470. FG_GAP. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q924W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVAGQLCLL YLSAGLLARL STAFNLDTRE DNVIRKSGDP GSLFGFSLAM
60 70 80 90
HWQLQPEDKR LLLVGAPRAE ALPLQKANRT GGLYSCDITS RGPCTRIVF
Length:99
Mass (Da):10,765
Last modified:December 1, 2001 - v1
Checksum:i3F0A90BB12E79CE1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei99Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ312933 mRNA. Translation: CAC38095.1.
RefSeqiNP_446177.1. NM_053725.1.
UniGeneiRn.22382.

Genome annotation databases

GeneIDi114517.
KEGGirno:114517.
UCSCiRGD:621633. rat.

Similar proteinsi

Entry informationi

Entry nameiQ924W3_RAT
AccessioniPrimary (citable) accession number: Q924W3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: August 30, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)