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Protein
Submitted name:

Alpha 2 integrin

Gene

Itga2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IntegrinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha 2 integrinImported
Gene namesi
Name:Itga2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi621632. Itga2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei278 – 30023HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ924S3.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015940.

Structurei

3D structure databases

ProteinModelPortaliQ924S3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 178173Integrin_alpha2InterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410XPVZ. LUCA.
KOG3637. Eukaryota.
HOGENOMiHOG000059610.
PhylomeDBiQ924S3.

Family and domain databases

InterProiIPR013649. Integrin_alpha-2.
IPR018184. Integrin_alpha_C_CS.
IPR032695. Integrin_dom.
[Graphical view]
PfamiPF00357. Integrin_alpha. 1 hit.
PF08441. Integrin_alpha2. 1 hit.
[Graphical view]
SUPFAMiSSF69179. SSF69179. 2 hits.
PROSITEiPS00242. INTEGRIN_ALPHA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q924S3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PVDGTEVTCQ IGSSQKSVTC DVGYPALKSE QQVTFTINLD FNLQNLQNQA
60 70 80 90 100
AINFQAFSES QETNKADNSV SLIVPLLYDA ELHLTRSTNI NFYEISSDEN
110 120 130 140 150
APSVINSVED IGPEFIFSLK ITAGSAPVSM ASVTIHIPLH TKEKNPLLYL
160 170 180 190 200
TGIQTDKAGD ISCRAEINPL NLPHTASPVS FKSENFRHMK ELDCKTTSCS
210 220 230 240 250
NVSCWLKDLH MKAEYFINVT TRVWNRTFAA STFQTVQLTA AAEIDTHNPQ
260 270 280 290 300
LFVIEENAVT IPLMIMKPTE KAEVPTGVII GSIIAGILLL LAMVAGLWKL
310 320
GFFKRQYKKM GQNPDETDET TELNS
Length:325
Mass (Da):35,866
Last modified:December 1, 2001 - v1
Checksum:iBAB76926EFD1B96F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB067445 mRNA. Translation: BAB62267.1.
UniGeneiRn.83597.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB067445 mRNA. Translation: BAB62267.1.
UniGeneiRn.83597.

3D structure databases

ProteinModelPortaliQ924S3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015940.

Proteomic databases

PaxDbiQ924S3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi621632. Itga2.

Phylogenomic databases

eggNOGiENOG410XPVZ. LUCA.
KOG3637. Eukaryota.
HOGENOMiHOG000059610.
PhylomeDBiQ924S3.

Family and domain databases

InterProiIPR013649. Integrin_alpha-2.
IPR018184. Integrin_alpha_C_CS.
IPR032695. Integrin_dom.
[Graphical view]
PfamiPF00357. Integrin_alpha. 1 hit.
PF08441. Integrin_alpha2. 1 hit.
[Graphical view]
SUPFAMiSSF69179. SSF69179. 2 hits.
PROSITEiPS00242. INTEGRIN_ALPHA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Rat alpha2 integrin cDNA."
    Tateno C., Asahina K., Yoshizato K.
    Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ924S3_RAT
AccessioniPrimary (citable) accession number: Q924S3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 20, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.