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Unreviewed, UniProtKB/TrEMBL Q924N2 (Q924N2_RAT)

Last modified November 3, 2009. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Frizzled related protein EMBL AAK58511.1
Gene names
Name: Sfrp4 RGD 621075
Synonyms: Frp EMBL AAK58511.1
OrganismRattus norvegicus (Rat) EMBL AAK58511.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 FZ (frizzled) domain. Spearmint SPM015526

Contains 1 NTR domain. Spearmint SPM001134

Sequences

Sequence LengthMass (Da)Tools
Q924N2-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 8AB612A48933AAE1

FASTA30334,507
        10         20         30         40         50         60 
MLLSILVALC LWLRLALGVR GAPCEAVRIP MCRHMPWNIT RMPNHLHHST QENAILAIEQ 

        70         80         90        100        110        120 
YEELVDVNCS SVLSFFLCAM YAPICTLEFL HDPIKPCKSV CQRARDDCEP LMKMYNHSWP 

       130        140        150        160        170        180 
ESLACDELPV YDRGVCISPE AIVTDLPEDV KWIDITPDMM VQERSFDADC KHLSPDRCKC 

       190        200        210        220        230        240 
KKVKPTLATY LSKNYSYVIH AKIKAVQRSG CNEVTTVVDV KEIFKSSSPI PRTQVPLITN 

       250        260        270        280        290        300 
SSCQCPHILP HQDVLIMCYE RRSRMMLLEN CLVEKWRDQL SRRSTDVHQV AVCTAVATTE 


AAQ 

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References

[1]"Brain specific rat frizzled related protein gene."
Chan K.W., Yam J.W.P., Hsiao W.W.L.
Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AF220608 mRNA. Translation: AAK58511.1.
IPIIPI00204890.
UniGeneRn.10788

3D structure databases

HSSPHSSP built from PDB template 1IJX based on UniProtKB P97401.
SMRQ924N2. Positions 22-144.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ924N2.

Genome annotation databases

EnsemblENSRNOT00000025645; ENSRNOP00000025645; ENSRNOG00000018893; Rattus norvegicus. [Genome view]
ENSRNOT00000064406; ENSRNOP00000059074; ENSRNOG00000018893; Rattus norvegicus. [Genome view]
UCSCAF220608. rat.

Phylogenomic databases

HOVERGENQ924N2.

Gene expression databases

ArrayExpressQ924N2.
GenevestigatorQ924N2.

Family and domain databases

InterProIPR020067. Frizzled-like_dom.
IPR000024. Frizzled_Cys-rich.
IPR020068. Frizzled_dom_subgr.
IPR015526. Frizzled_related.
IPR001134. Netrin_domain.
IPR018933. Netrin_module_non-TIMP.
IPR008993. TIMP-like_OB-fold.
[Graphical view]
Gene3DG3DSA:1.10.2000.10. Frizzled_Cys-rich. 1 hit.
PANTHERPTHR11309. Fz_related. 1 hit.
PfamPF01392. Fz. 1 hit.
PF01759. NTR. 1 hit.
[Graphical view]
SMARTSM00643. C345C. 1 hit.
SM00063. FRI. 1 hit.
[Graphical view]
PROSITEPS50038. FZ. 1 hit.
PS50189. NTR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ924N2_RAT
AccessionPrimary (citable) accession number: Q924N2
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: November 3, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information