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Q924M0 (Q924M0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
GABA type B receptor 1f EMBL AAK69540.1
Submitted name:
Gamma-aminobutyric acid (GABA) B receptor 1, isoform CRA_a EMBL EDL84628.1
Gene names
Name:Gabbr1 RGD 621537 EMBL EDL84628.1
ORF Names:rCG_58602 EMBL EDL84628.1
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length984 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q924M0 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: A93012CFA296FBDA

FASTA984110,742
        10         20         30         40         50         60 
MLLLLLVPLF LRPLGAGGAQ TPNATSEGCQ IIHPPWEGGI RYRGLTRDQV KAINFLPVDY 

        70         80         90        100        110        120 
EIEYVCRGER EVVGPKVRKC LANGSWTDMD TPSRCVRICS KSYLTLENGK VFLTGGDLPA 

       130        140        150        160        170        180 
LDGARVEFRC DPDFHLVGSS RSVCSQGQWS TPKPHCQERR AVYIGALFPM SGGWPGGQAC 

       190        200        210        220        230        240 
QPAVEMALED VNSRRDILPD YELKLIHHDS KCDPGQATKY LYELLYNDPI KIILMPGCSS 

       250        260        270        280        290        300 
VSTLVAEAAR MWNLIVLSYG SSSPALSNRQ RFPTFFRTHP SATLHNPTRV KLFEKWGWKK 

       310        320        330        340        350        360 
IATIQQTTEV FTSTLDDLEE RVKEAGIEIT FRQSFFSDPA VPVKNLKRQD ARIIVGLFYE 

       370        380        390        400        410        420 
TEARKVFCEV YKERLFGKKY VWFLIGWYAD NWFKTYDPSI NCTVEEMTEA VEGHITTEIV 

       430        440        450        460        470        480 
MLNPANTRSI SNMTSQEFVE KLTKRLKRHP EETGGFQEAP LAYDAIWALA LALNKTSGGG 

       490        500        510        520        530        540 
GRSGVRLEDF NYNNQTITDQ IYRAMNSSSF EGVSGHVVFD ASGSRMAWTL IEQLQGGSYK 

       550        560        570        580        590        600 
KIGYYDSTKD DLSWSKTDKW IGGSPPADQT LVIKTFRFLS QKLFISVSVL SSLGIVLAVV 

       610        620        630        640        650        660 
CLSFNIYNSH VRYIQNSQPN LNNLTAVGCS LALAAVFPLG LDGYHIGRSQ FPFVCQARLW 

       670        680        690        700        710        720 
LLGLGFSLGY GSMFTKIWWV HTVFTKKEEK KEWRKTLEPW KLYATVGLLV GMDVLTLAIW 

       730        740        750        760        770        780 
QIVDPLHRTI ETFAKEEPKE DIDVSILPQL EHCSSKKMNT WLGELWSFAV SSDVQRRATV 

       790        800        810        820        830        840 
GGDSPICVWP APESIFYGYK GLLLLLGIFL AYETKSVSTE KINDHRAVGM AIYNVAVLCL 

       850        860        870        880        890        900 
ITAPVTMILS SQQDAAFAFA SLAIVFSSYI TLVVLFVPKM RRLITRGEWQ SETQDTMKTG 

       910        920        930        940        950        960 
SSTNNNEEEK SRLLEKENRE LEKIIAEKEE RVSELRHQLQ SRQQLRSRRH PPTPPDPSGG 

       970        980 
LPRGPSEPPD RLSCDGSRVH LLYK

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References

[1]"Cloning and tissue distribution of a novel isoform of the rat GABA(B)R1 receptor subunit."
Wei K., Eubanks J.H., Francis J., Jia Z., Snead O.C. 3rd
NeuroReport 12:833-837(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAK69540.1.
[2]"Gene and alternative splicing annotation with AIR."
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G.
Genome Res. 15:54-66(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL84628.1.
[3]Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. expand/collapse author list , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BN EMBL EDL84628.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF283276 mRNA. Translation: AAK69540.1.
CH474093 Genomic DNA. Translation: EDL84628.1.
IPIIPI00326133.
UniGeneRn.30059.

3D structure databases

SMRQ924M0. Positions 96-157.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD621537. Gabbr1.

Phylogenomic databases

HOGENOMHOG000016575.
HOVERGENHBG051688.

Gene expression databases

GenevestigatorQ924M0.

Family and domain databases

InterProIPR001828. ANF_lig-bd_rcpt.
IPR017978. GPCR_3_C.
IPR002455. GPCR_3_GABA_rcpt_B.
IPR002456. GPCR_3_GABA_rcpt_B1.
IPR000436. Sushi_SCR_CCP.
[Graphical view]
PfamPF00003. 7tm_3. 1 hit.
PF01094. ANF_receptor. 1 hit.
PF00084. Sushi. 2 hits.
[Graphical view]
PRINTSPR01177. GABAB1RECPTR.
PR01176. GABABRECEPTR.
SMARTSM00032. CCP. 2 hits.
[Graphical view]
SUPFAMSSF57535. Complement_control_module. 2 hits.
PROSITEPS50259. G_PROTEIN_RECEP_F3_4. 1 hit.
PS50923. SUSHI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ924M0_RAT
AccessionPrimary (citable) accession number: Q924M0
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 29, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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