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Protein

Alpha-L-arabinofuranosidase

Gene

abf1

Organism
Hypocrea jecorina (Trichoderma reesei)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.

Pathwayi

GO - Molecular functioni

  1. alpha-L-arabinofuranosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. arabinan catabolic process Source: UniProtKB-UniPathway
  2. L-arabinose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-16540.
UniPathwayiUPA00667.

Protein family/group databases

CAZyiCBM42. Carbohydrate-Binding Module Family 42.
GH54. Glycoside Hydrolase Family 54.
mycoCLAPiABF54A_TRIRE.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Short name:
Arabinosidase
Gene namesi
Name:abf1
OrganismiHypocrea jecorina (Trichoderma reesei)
Taxonomic identifieri51453 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeHypocrealesHypocreaceaeTrichoderma

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 500479Alpha-L-arabinofuranosidasePRO_0000012224Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi467 – 4671N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiQ92455.

Interactioni

Protein-protein interaction databases

STRINGi51453.JGI123283.

Structurei

3D structure databases

ProteinModelPortaliQ92455.
SMRiQ92455. Positions 22-500.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 54 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG83819.
OMAiNIVAAKY.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR015289. A-L-arabinofuranosidase_B_cat.
IPR007934. AbfB_ABD.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF05270. AbfB. 1 hit.
PF09206. ArabFuran-catal. 1 hit.
[Graphical view]
SUPFAMiSSF110221. SSF110221. 1 hit.
SSF49899. SSF49899. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q92455-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSNARIIAA GCIAAGSLVA AGPCDIYSSG GTPCVAAHST TRALFSAYTG
60 70 80 90 100
PLYQVKRGSD GATTAISPLS SGVANAAAQD AFCAGTTCLI TIIYDQSGRG
110 120 130 140 150
NHLTQAPPGG FSGPESNGYD NLASAIGAPV TLNGQKAYGV FVSPGTGYRN
160 170 180 190 200
NAASGTAKGD AAEGMYAVLD GTHYNGACCF DYGNAETNSR DTGNGHMEAI
210 220 230 240 250
YFGDSTVWGT GSGKGPWIMA DLENGLFSGS SPGNNAGDPS ISYRFVTAAI
260 270 280 290 300
KGQPNQWAIR GGNAASGSLS TFYSGARPQV SGYNPMSKEG AIILGIGGDN
310 320 330 340 350
SNGAQGTFYE GVMTSGYPSD ATENSVQANI VAARYAVAPL TSGPALTVGS
360 370 380 390 400
SISLRATTAC CTTRYIAHSG STVNTQVVSS SSATALKQQA SWTVRAGLAN
410 420 430 440 450
NACFSFESRD TSGSYIRHSN FGLVLNANDG SKLFAEDATF CTQAGINGQG
460 470 480 490 500
SSIRSWSYPT RYFRHYNNTL YIASNGGVHV FDATAAFNDD VSFVVSGGFA
Length:500
Mass (Da):51,115
Last modified:February 1, 1997 - v1
Checksum:iFC6B4DB03EE3C762
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z69252 mRNA. Translation: CAA93243.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z69252 mRNA. Translation: CAA93243.1.

3D structure databases

ProteinModelPortaliQ92455.
SMRiQ92455. Positions 22-500.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi51453.JGI123283.

Protein family/group databases

CAZyiCBM42. Carbohydrate-Binding Module Family 42.
GH54. Glycoside Hydrolase Family 54.
mycoCLAPiABF54A_TRIRE.

Proteomic databases

PRIDEiQ92455.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG83819.
OMAiNIVAAKY.

Enzyme and pathway databases

UniPathwayiUPA00667.
BioCyciMetaCyc:MONOMER-16540.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR015289. A-L-arabinofuranosidase_B_cat.
IPR007934. AbfB_ABD.
IPR013320. ConA-like_dom.
[Graphical view]
PfamiPF05270. AbfB. 1 hit.
PF09206. ArabFuran-catal. 1 hit.
[Graphical view]
SUPFAMiSSF110221. SSF110221. 1 hit.
SSF49899. SSF49899. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning of genes encoding alpha-L-arabinofuranosidase and beta-xylosidase from Trichoderma reesei by expression in Saccharomyces cerevisiae."
    Margolles-Clark E., Tenkanen M., Nakari-Setaelae T., Penttilae M.
    Appl. Environ. Microbiol. 62:3840-3846(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: ATCC 56765 / Rut C-30.

Entry informationi

Entry nameiABF1_HYPJE
AccessioniPrimary (citable) accession number: Q92455
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: January 7, 2015
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.