Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q92455 (ABF1_HYPJE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Alpha-L-arabinofuranosidase

Short name=Arabinosidase
EC=3.2.1.55
Gene names
Name:abf1
OrganismHypocrea jecorina (Trichoderma reesei)
Taxonomic identifier51453 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeHypocrealesHypocreaceaeTrichoderma

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.

Pathway

Glycan metabolism; L-arabinan degradation.

Sequence similarities

Belongs to the glycosyl hydrolase 54 family.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
Gene Ontology (GO)
   Biological_processL-arabinose metabolic process

Inferred from electronic annotation. Source: InterPro

arabinan catabolic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalpha-L-arabinofuranosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 500479Alpha-L-arabinofuranosidase
PRO_0000012224

Amino acid modifications

Glycosylation4671N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q92455 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: FC6B4DB03EE3C762

FASTA50051,115
        10         20         30         40         50         60 
MLSNARIIAA GCIAAGSLVA AGPCDIYSSG GTPCVAAHST TRALFSAYTG PLYQVKRGSD 

        70         80         90        100        110        120 
GATTAISPLS SGVANAAAQD AFCAGTTCLI TIIYDQSGRG NHLTQAPPGG FSGPESNGYD 

       130        140        150        160        170        180 
NLASAIGAPV TLNGQKAYGV FVSPGTGYRN NAASGTAKGD AAEGMYAVLD GTHYNGACCF 

       190        200        210        220        230        240 
DYGNAETNSR DTGNGHMEAI YFGDSTVWGT GSGKGPWIMA DLENGLFSGS SPGNNAGDPS 

       250        260        270        280        290        300 
ISYRFVTAAI KGQPNQWAIR GGNAASGSLS TFYSGARPQV SGYNPMSKEG AIILGIGGDN 

       310        320        330        340        350        360 
SNGAQGTFYE GVMTSGYPSD ATENSVQANI VAARYAVAPL TSGPALTVGS SISLRATTAC 

       370        380        390        400        410        420 
CTTRYIAHSG STVNTQVVSS SSATALKQQA SWTVRAGLAN NACFSFESRD TSGSYIRHSN 

       430        440        450        460        470        480 
FGLVLNANDG SKLFAEDATF CTQAGINGQG SSIRSWSYPT RYFRHYNNTL YIASNGGVHV 

       490        500 
FDATAAFNDD VSFVVSGGFA 

« Hide

References

[1]"Cloning of genes encoding alpha-L-arabinofuranosidase and beta-xylosidase from Trichoderma reesei by expression in Saccharomyces cerevisiae."
Margolles-Clark E., Tenkanen M., Nakari-Setaelae T., Penttilae M.
Appl. Environ. Microbiol. 62:3840-3846(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: ATCC 56765 / Rut C-30.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z69252 mRNA. Translation: CAA93243.1.

3D structure databases

ProteinModelPortalQ92455.
SMRQ92455. Positions 22-500.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING51453.JGI123283.

Protein family/group databases

CAZyCBM42. Carbohydrate-Binding Module Family 42.
GH54. Glycoside Hydrolase Family 54.
mycoCLAPABF54A_TRIRE.

Proteomic databases

PRIDEQ92455.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGNOG83819.
OMANIVAAKY.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-16540.
UniPathwayUPA00667.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR015289. A-L-arabinofuranosidase_B_cat.
IPR007934. AbfB.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view]
PfamPF05270. AbfB. 1 hit.
PF09206. ArabFuran-catal. 1 hit.
[Graphical view]
SUPFAMSSF110221. SSF110221. 1 hit.
SSF49899. SSF49899. 1 hit.
ProtoNetSearch...

Entry information

Entry nameABF1_HYPJE
AccessionPrimary (citable) accession number: Q92455
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries