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Protein

PDZK1-interacting protein 1

Gene

Pdzk1ip1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
PDZK1-interacting protein 1
Alternative name(s):
17 kDa membrane-associated protein
Gene namesi
Name:Pdzk1ip1
Synonyms:Map17
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi620952. Pdzk1ip1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei30 – 5021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 114114PDZK1-interacting protein 1PRO_0000058286Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei85 – 851PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ923S2.

PTM databases

iPTMnetiQ923S2.
PhosphoSiteiQ923S2.

Expressioni

Gene expression databases

BgeeiENSRNOG00000008161.
GenevisibleiQ923S2. RN.

Interactioni

Subunit structurei

Interacts with PDZK1.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011434.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410J305. Eukaryota.
ENOG41116TZ. LUCA.
GeneTreeiENSGT00390000014478.
HOGENOMiHOG000231172.
HOVERGENiHBG080155.
InParanoidiQ923S2.
OMAiVNRFWCK.
OrthoDBiEOG091G13G3.
PhylomeDBiQ923S2.
TreeFamiTF328829.

Family and domain databases

InterProiIPR026628. PDZK-int_prot1.
IPR031627. PDZK1IP1/SMIM24.
[Graphical view]
PANTHERiPTHR15296:SF0. PTHR15296:SF0. 1 hit.
PfamiPF15807. MAP17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q923S2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLALSLLALG LLAEVAPASC QQGLGNLQPW MQGLIAVAVF LVLVAIAFAV
60 70 80 90 100
NHFWCQEEQE PGSTMMITGN KADGVLVGMD GRYSSMASGF RSSEHKNAFE
110
NVLEEEGRVR STPM
Length:114
Mass (Da):12,243
Last modified:December 1, 2001 - v1
Checksum:iD207C0190313ED48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF402772 mRNA. Translation: AAK94063.1.
RefSeqiNP_569085.1. NM_130401.1.
XP_006238682.1. XM_006238620.2.
XP_008762191.1. XM_008763969.1.
XP_008762192.1. XM_008763970.1.
UniGeneiRn.3605.

Genome annotation databases

EnsembliENSRNOT00000011434; ENSRNOP00000011434; ENSRNOG00000008161.
GeneIDi81916.
KEGGirno:81916.
UCSCiRGD:620952. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF402772 mRNA. Translation: AAK94063.1.
RefSeqiNP_569085.1. NM_130401.1.
XP_006238682.1. XM_006238620.2.
XP_008762191.1. XM_008763969.1.
XP_008762192.1. XM_008763970.1.
UniGeneiRn.3605.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011434.

PTM databases

iPTMnetiQ923S2.
PhosphoSiteiQ923S2.

Proteomic databases

PaxDbiQ923S2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000011434; ENSRNOP00000011434; ENSRNOG00000008161.
GeneIDi81916.
KEGGirno:81916.
UCSCiRGD:620952. rat.

Organism-specific databases

CTDi10158.
RGDi620952. Pdzk1ip1.

Phylogenomic databases

eggNOGiENOG410J305. Eukaryota.
ENOG41116TZ. LUCA.
GeneTreeiENSGT00390000014478.
HOGENOMiHOG000231172.
HOVERGENiHBG080155.
InParanoidiQ923S2.
OMAiVNRFWCK.
OrthoDBiEOG091G13G3.
PhylomeDBiQ923S2.
TreeFamiTF328829.

Miscellaneous databases

PROiQ923S2.

Gene expression databases

BgeeiENSRNOG00000008161.
GenevisibleiQ923S2. RN.

Family and domain databases

InterProiIPR026628. PDZK-int_prot1.
IPR031627. PDZK1IP1/SMIM24.
[Graphical view]
PANTHERiPTHR15296:SF0. PTHR15296:SF0. 1 hit.
PfamiPF15807. MAP17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPDZ1I_RAT
AccessioniPrimary (citable) accession number: Q923S2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: December 1, 2001
Last modified: September 7, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.