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Protein

60S ribosomal protein L36-A

Gene

rpl3601

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for L36 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36-A
Gene namesi
Name:rpl3601
Synonyms:rpl36, rpl36a
ORF Names:SPCC970.05
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC970.05.
PomBaseiSPCC970.05. rpl3601.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001950181 – 9960S ribosomal protein L36-AAdd BLAST99

Proteomic databases

MaxQBiQ92365.
PRIDEiQ92365.

Interactioni

Protein-protein interaction databases

BioGridi275461. 6 interactors.
IntActiQ92365. 2 interactors.
MINTiMINT-4701339.
STRINGi4896.SPCC970.05.1.

Structurei

3D structure databases

SMRiQ92365.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000155312.
InParanoidiQ92365.
KOiK02920.
OMAiNICAKRR.
OrthoDBiEOG092C5H47.
PhylomeDBiQ92365.

Family and domain databases

InterProiView protein in InterPro
IPR000509. Ribosomal_L36e.
PANTHERiPTHR10114. PTHR10114. 1 hit.
PfamiView protein in Pfam
PF01158. Ribosomal_L36e. 1 hit.
PROSITEiView protein in PROSITE
PS01190. RIBOSOMAL_L36E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92365-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPGLVVGLN KGKVLTKRQL PERPSRRKGQ LSKRTSFVRS IVREVAGFAP
60 70 80 90
YERRVMELIR NSQDKRARKL AKKRLGTLKR AKGKIEELTS VIQSSRLAH
Length:99
Mass (Da):11,263
Last modified:July 15, 1999 - v2
Checksum:i51C571970B34944C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA20698.1.
D88771 mRNA. Translation: BAA13701.1.
PIRiT41675. T43238.
RefSeqiNP_587850.1. NM_001022843.2.

Genome annotation databases

EnsemblFungiiSPCC970.05.1; SPCC970.05.1:pep; SPCC970.05.
GeneIDi2538883.
KEGGispo:SPCC970.05.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL36A_SCHPO
AccessioniPrimary (citable) accession number: Q92365
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 15, 1999
Last modified: July 5, 2017
This is version 113 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families