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Protein

Pumilio domain-containing protein C6G9.14

Gene

SPAC6G9.14

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Pumilio domain-containing protein C6G9.14
Gene namesi
ORF Names:SPAC6G9.14
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC6G9.14.
PomBaseiSPAC6G9.14.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 681681Pumilio domain-containing protein C6G9.14PRO_0000075938Add
BLAST

Proteomic databases

MaxQBiQ92359.

Interactioni

Protein-protein interaction databases

BioGridi278535. 39 interactions.
MINTiMINT-4701308.

Structurei

3D structure databases

ProteinModelPortaliQ92359.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini319 – 659341PUM-HDPROSITE-ProRule annotationAdd
BLAST
Repeati342 – 37837Pumilio 1Add
BLAST
Repeati379 – 41436Pumilio 2Add
BLAST
Repeati415 – 45137Pumilio 3Add
BLAST
Repeati452 – 48736Pumilio 4Add
BLAST
Repeati488 – 52336Pumilio 5Add
BLAST
Repeati524 – 55936Pumilio 6Add
BLAST
Repeati560 – 59536Pumilio 7Add
BLAST
Repeati596 – 63338Pumilio 8Add
BLAST

Sequence similaritiesi

Contains 1 PUM-HD domain.PROSITE-ProRule annotation
Contains 8 pumilio repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

InParanoidiQ92359.
OMAiNRIINEM.
OrthoDBiEOG092C0M8D.

Family and domain databases

CDDicd07920. Pumilio. 1 hit.
Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR033133. PUM-HD.
IPR033712. Pumilio_RNA-bd.
IPR001313. Pumilio_RNA-bd_rpt.
[Graphical view]
PfamiPF00806. PUF. 6 hits.
[Graphical view]
SMARTiSM00025. Pumilio. 8 hits.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50302. PUM. 8 hits.
PS50303. PUM_HD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92359-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQSSKSHP SFMSTEYSLP VFSSQYSDIE NKDVLKSNSW DPYAANAPIA
60 70 80 90 100
LSEIPSSSKS GKTNGSKAAV ESGLASGAFG NRTGNMNRNT SMSGYTFGSS
110 120 130 140 150
NFVPYNLLSN TPSFTTSHSS STTFVPPATM GGGLNNLSSP SSSLYLPGSA
160 170 180 190 200
SYQRSNSKNS SASILQMNTT LDDIPILLRR PGLSSYTPGP STSRRSISSS
210 220 230 240 250
SNLGGNPGLI ANNPSASKNF AFTSGSSSTN NSTTSSSSMA NGLQSISKHS
260 270 280 290 300
AAFPLLSNAT SFFGENLTPS LAASTASTGS TDSSGSNIAN TLIAPTPTIS
310 320 330 340 350
PPSANTVGNP SPADTPGFNV PSLISDDPSV SSSLSSSVAS LSLQNSNILS
360 370 380 390 400
FCKDQHGCRY LQRLLEKKNQ SHIDAVFAET HPYLAVLMVD AFGNYLCQKL
410 420 430 440 450
FEHASEAQRS TFIQIIAPKL VPISFNMHGT RALQKIIDLV SSPDQISCIV
460 470 480 490 500
NALRPNVVLL TKDLNGNHVI QKCLNKFSQE DCQFIFDAIC EDPLDVSTHR
510 520 530 540 550
HGCCVVQRCF DHASPAQIEQ LVEHIVPHAL TLVQDAFGNY VLQYVLELNN
560 570 580 590 600
PNHTEAIISY FLYKVRALST QKFSSNVMEK CIFFAPAAIK EKLISELMDE
610 620 630 640 650
KHLPKLLRDS FANYVIQTAL DNASVKQRAE LVERIKPLIP SIKNTPCGRR
660 670 680
ILSKLERRHP SSKEKPIVYS NSERVNTSSS A
Length:681
Mass (Da):73,292
Last modified:February 1, 1997 - v1
Checksum:i755A25C68A92D727
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB03616.1.
PIRiT39076.
RefSeqiNP_594123.1. NM_001019547.2.

Genome annotation databases

EnsemblFungiiSPAC6G9.14.1; SPAC6G9.14.1:pep; SPAC6G9.14.
GeneIDi2542056.
KEGGispo:SPAC6G9.14.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB03616.1.
PIRiT39076.
RefSeqiNP_594123.1. NM_001019547.2.

3D structure databases

ProteinModelPortaliQ92359.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278535. 39 interactions.
MINTiMINT-4701308.

Proteomic databases

MaxQBiQ92359.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC6G9.14.1; SPAC6G9.14.1:pep; SPAC6G9.14.
GeneIDi2542056.
KEGGispo:SPAC6G9.14.

Organism-specific databases

EuPathDBiFungiDB:SPAC6G9.14.
PomBaseiSPAC6G9.14.

Phylogenomic databases

InParanoidiQ92359.
OMAiNRIINEM.
OrthoDBiEOG092C0M8D.

Miscellaneous databases

PROiQ92359.

Family and domain databases

CDDicd07920. Pumilio. 1 hit.
Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR033133. PUM-HD.
IPR033712. Pumilio_RNA-bd.
IPR001313. Pumilio_RNA-bd_rpt.
[Graphical view]
PfamiPF00806. PUF. 6 hits.
[Graphical view]
SMARTiSM00025. Pumilio. 8 hits.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50302. PUM. 8 hits.
PS50303. PUM_HD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDHE_SCHPO
AccessioniPrimary (citable) accession number: Q92359
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.