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Protein

60S ribosomal protein L24-A

Gene

rpl2401

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L24-A
Gene namesi
Name:rpl2401
Synonyms:rpl24, rpl24a
ORF Names:SPAC6G9.09c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC6G9.09c.
PomBaseiSPAC6G9.09c. rpl2401.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14914960S ribosomal protein L24-APRO_0000136891Add
BLAST

Proteomic databases

MaxQBiQ92354.

Interactioni

Protein-protein interaction databases

BioGridi278067. 25 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ92354.
SMRiQ92354. Positions 4-56.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L24e family.Curated

Phylogenomic databases

HOGENOMiHOG000184343.
InParanoidiQ92354.
KOiK02896.
OMAiNGKCESA.
OrthoDBiEOG718KQP.
PhylomeDBiQ92354.

Family and domain databases

Gene3Di2.30.170.20. 1 hit.
InterProiIPR000988. Ribosomal_L24e-rel.
IPR023442. Ribosomal_L24e_CS.
IPR023441. Ribosomal_L24e_dom.
[Graphical view]
PANTHERiPTHR10792. PTHR10792. 1 hit.
PfamiPF01246. Ribosomal_L24e. 1 hit.
[Graphical view]
PROSITEiPS01073. RIBOSOMAL_L24E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92354-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVEVCSFSG SKVYPGAGRL FVRGDNKVFR FVNKKSESLF LQRKNPRRLS
60 70 80 90 100
WTVLYRRMHK KGISEEHAKK RTRRTVKHQR GIVGANLDVI KEKRNQRPEV
110 120 130 140
RAAARAAALK QRKDKKAASE SEKKAIKAKS AASSARGQAI KNAKAAARH
Length:149
Mass (Da):16,837
Last modified:February 1, 1997 - v1
Checksum:iF6B733B01B5C8193
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB03611.1.
PIRiT39071.
RefSeqiNP_594118.1. NM_001019542.2.

Genome annotation databases

EnsemblFungiiSPAC6G9.09c.1; SPAC6G9.09c.1:pep; SPAC6G9.09c.
GeneIDi2541570.
KEGGispo:SPAC6G9.09c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB03611.1.
PIRiT39071.
RefSeqiNP_594118.1. NM_001019542.2.

3D structure databases

ProteinModelPortaliQ92354.
SMRiQ92354. Positions 4-56.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278067. 25 interactions.

Proteomic databases

MaxQBiQ92354.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC6G9.09c.1; SPAC6G9.09c.1:pep; SPAC6G9.09c.
GeneIDi2541570.
KEGGispo:SPAC6G9.09c.

Organism-specific databases

EuPathDBiFungiDB:SPAC6G9.09c.
PomBaseiSPAC6G9.09c. rpl2401.

Phylogenomic databases

HOGENOMiHOG000184343.
InParanoidiQ92354.
KOiK02896.
OMAiNGKCESA.
OrthoDBiEOG718KQP.
PhylomeDBiQ92354.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ92354.

Family and domain databases

Gene3Di2.30.170.20. 1 hit.
InterProiIPR000988. Ribosomal_L24e-rel.
IPR023442. Ribosomal_L24e_CS.
IPR023441. Ribosomal_L24e_dom.
[Graphical view]
PANTHERiPTHR10792. PTHR10792. 1 hit.
PfamiPF01246. Ribosomal_L24e. 1 hit.
[Graphical view]
PROSITEiPS01073. RIBOSOMAL_L24E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiRL24A_SCHPO
AccessioniPrimary (citable) accession number: Q92354
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: February 1, 1997
Last modified: June 8, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

There are two genes for L24 in S.pombe.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.