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Protein

Endo-1,4-beta-xylanase

Gene

xynA

Organism
Orpinomyces sp. (strain PC-2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

Pathwayi: xylan degradation

This protein is involved in the pathway xylan degradation, which is part of Glycan degradation.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway xylan degradation and in Glycan degradation.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationUniRule annotationImported

Enzyme and pathway databases

UniPathwayiUPA00114.

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-1,4-beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynAImported
OrganismiOrpinomyces sp. (strain PC-2)Imported
Taxonomic identifieri50059 [NCBI]
Taxonomic lineageiEukaryotaFungiNeocallimastigomycotaNeocallimastigomycetesNeocallimastigalesNeocallimastigaceaeOrpinomyces

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 362344Endo-1,4-beta-xylanaseSequence analysisPRO_5004320941Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ92257.
SMRiQ92257. Positions 31-248, 284-317.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 243208GH11 (glycosyl hydrolase family 11)InterPro annotationAdd
BLAST
Domaini278 – 31841CBM10 (carbohydrate binding type-10)InterPro annotationAdd
BLAST
Domaini321 – 36141CBM10 (carbohydrate binding type-10)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 11 (cellulase G) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.180. 1 hit.
3.90.1220.10. 2 hits.
InterProiIPR002883. CBM10/Dockerin_dom.
IPR013320. ConA-like_dom.
IPR009034. Dockerin_dom_fun.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF02013. CBM_10. 2 hits.
PF00457. Glyco_hydro_11. 1 hit.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF64571. SSF64571. 2 hits.
PROSITEiPS51763. CBM10. 2 hits.
PS00776. GH11_1. 1 hit.
PS00777. GH11_2. 1 hit.
PS51761. GH11_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92257-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTIKFLFAL AITTVAKAQW GGNGGASAGQ RLSVGGGQNQ HKGVFDGFSY
60 70 80 90 100
EIWLDNTGGS GSMTLGKGAT FKAEWSAAVN RGNFLARRGL DFGSTKKATA
110 120 130 140 150
YEYIGLDYEA SYRQTASASG NSRLCVYGWF QNRGVQGVPL VEYYIIEDWV
160 170 180 190 200
DWVPDAQGKM VTIDGAQYKI FQMDHTGPTI NGGNETFKQY FSVRQQKRTS
210 220 230 240 250
GHITVSDHFK AWSNQGWGIG NLYEVALNAE GWQSSGVADV PKLDVYTTKQ
260 270 280 290 300
GSAPRTTTTT TRTTTRTTTK TLPTTNKKCS AKITAQGYKC CSDPNCVVYY
310 320 330 340 350
TDEDGTWGVE NNQWCGCGVE ACSGKITAQG YKCCSDPKCV VYYTDDDGKW
360
GVENNEWCGC GL
Length:362
Mass (Da):39,542
Last modified:February 1, 1997 - v1
Checksum:i2257AE037090CE61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U57819 mRNA. Translation: AAD04194.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U57819 mRNA. Translation: AAD04194.1.

3D structure databases

ProteinModelPortaliQ92257.
SMRiQ92257. Positions 31-248, 284-317.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayiUPA00114.

Family and domain databases

Gene3Di2.60.120.180. 1 hit.
3.90.1220.10. 2 hits.
InterProiIPR002883. CBM10/Dockerin_dom.
IPR013320. ConA-like_dom.
IPR009034. Dockerin_dom_fun.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF02013. CBM_10. 2 hits.
PF00457. Glyco_hydro_11. 1 hit.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF64571. SSF64571. 2 hits.
PROSITEiPS51763. CBM10. 2 hits.
PS00776. GH11_1. 1 hit.
PS00777. GH11_2. 1 hit.
PS51761. GH11_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Li X.-L.
    Submitted (MAY-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PC-2Imported.
  2. "Monocentric and polycentric anaerobic fungi produce structurally related cellulases and xylanases."
    Li X.L., Chen H., Ljungdahl L.G.
    Appl. Environ. Microbiol. 63:628-635(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PC-2Imported.

Entry informationi

Entry nameiQ92257_ORPSP
AccessioniPrimary (citable) accession number: Q92257
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: June 8, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.