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Q921I1

- TRFE_MOUSE

UniProt

Q921I1 - TRFE_MOUSE

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Protein
Serotransferrin
Gene
Tf, Trf
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Transferrins are iron binding transport proteins which can bind two Fe3+ ions in association with the binding of an anion, usually bicarbonate. It is responsible for the transport of iron from sites of absorption and heme degradation to those of storage and utilization. Serum transferrin may also have a further role in stimulating cell proliferation.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi82 – 821Iron 1 By similarity
Metal bindingi114 – 1141Iron 1 By similarity
Binding sitei139 – 1391Carbonate 1 By similarity
Binding sitei143 – 1431Carbonate 1 By similarity
Binding sitei145 – 1451Carbonate 1; via amide nitrogen By similarity
Binding sitei146 – 1461Carbonate 1; via amide nitrogen By similarity
Metal bindingi207 – 2071Iron 1 By similarity
Metal bindingi268 – 2681Iron 1 By similarity
Metal bindingi410 – 4101Iron 2 By similarity
Metal bindingi448 – 4481Iron 2 By similarity
Binding sitei474 – 4741Carbonate 2 By similarity
Binding sitei478 – 4781Carbonate 2 By similarity
Binding sitei480 – 4801Carbonate 2; via amide nitrogen By similarity
Binding sitei481 – 4811Carbonate 2; via amide nitrogen By similarity
Metal bindingi537 – 5371Iron 2 By similarity
Metal bindingi605 – 6051Iron 2 By similarity

GO - Molecular functioni

  1. ferric iron binding Source: InterPro
  2. protein binding Source: MGI

GO - Biological processi

  1. ERK1 and ERK2 cascade Source: DFLAT
  2. SMAD protein signal transduction Source: MGI
  3. actin filament organization Source: DFLAT
  4. activation of JUN kinase activity Source: DFLAT
  5. cellular iron ion homeostasis Source: InterPro
  6. iron ion transport Source: MGI
  7. osteoclast differentiation Source: DFLAT
  8. positive regulation of bone resorption Source: DFLAT
  9. positive regulation of cell motility Source: DFLAT
  10. positive regulation of phosphorylation Source: DFLAT
  11. positive regulation of transcription, DNA-templated Source: DFLAT
Complete GO annotation...

Keywords - Biological processi

Ion transport, Iron transport, Transport

Keywords - Ligandi

Iron, Metal-binding

Enzyme and pathway databases

ReactomeiREACT_198515. Transferrin endocytosis and recycling.
REACT_205755. Iron uptake and transport.

Protein family/group databases

MEROPSiS60.972.

Names & Taxonomyi

Protein namesi
Recommended name:
Serotransferrin
Short name:
Transferrin
Alternative name(s):
Beta-1 metal-binding globulin
Siderophilin
Gene namesi
Name:Tf
Synonyms:Trf
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 9

Organism-specific databases

MGIiMGI:98821. Trf.

Subcellular locationi

GO - Cellular componenti

  1. coated pit Source: MGI
  2. dense body Source: MGI
  3. early endosome Source: MGI
  4. endocytic vesicle Source: MGI
  5. endosome Source: MGI
  6. extracellular region Source: UniProtKB-SubCell
  7. recycling endosome Source: MGI
  8. vesicle coat Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 By similarity
Add
BLAST
Chaini20 – 697678Serotransferrin
PRO_0000035716Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi28 ↔ 67 By similarity
Disulfide bondi38 ↔ 58 By similarity
Modified residuei42 – 421Omega-N-methylated arginine By similarity
Disulfide bondi137 ↔ 213 By similarity
Disulfide bondi156 ↔ 350 By similarity
Disulfide bondi177 ↔ 193 By similarity
Disulfide bondi180 ↔ 196 By similarity
Disulfide bondi190 ↔ 198 By similarity
Disulfide bondi246 ↔ 260 By similarity
Disulfide bondi363 ↔ 395 By similarity
Disulfide bondi373 ↔ 386 By similarity
Disulfide bondi420 ↔ 692 By similarity
Disulfide bondi435 ↔ 655 By similarity
Disulfide bondi472 ↔ 543 By similarity
Disulfide bondi496 ↔ 683 By similarity
Disulfide bondi506 ↔ 520 By similarity
Glycosylationi513 – 5131N-linked (GlcNAc...)1 Publication
Disulfide bondi517 ↔ 526 By similarity
Disulfide bondi583 ↔ 597 By similarity
Disulfide bondi633 ↔ 638 By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Methylation

Proteomic databases

MaxQBiQ921I1.
PaxDbiQ921I1.
PRIDEiQ921I1.

2D gel databases

REPRODUCTION-2DPAGEIPI00139788.
Q921I1.

PTM databases

PhosphoSiteiQ921I1.

Expressioni

Tissue specificityi

Expressed by the liver and secreted in plasma.1 Publication

Gene expression databases

BgeeiQ921I1.
CleanExiMM_TRF.
GenevestigatoriQ921I1.

Interactioni

Subunit structurei

Monomer.

Protein-protein interaction databases

IntActiQ921I1. 8 interactions.
MINTiMINT-1202663.

Structurei

3D structure databases

ProteinModelPortaliQ921I1.
SMRiQ921I1. Positions 20-694.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 347323Transferrin-like 1
Add
BLAST
Domaini360 – 682323Transferrin-like 2
Add
BLAST

Sequence similaritiesi

Belongs to the transferrin family.

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiNOG87503.
GeneTreeiENSGT00390000001619.
HOVERGENiHBG000055.
InParanoidiQ921I1.
KOiK14736.
OrthoDBiEOG7D59N7.
PhylomeDBiQ921I1.
TreeFamiTF324013.

Family and domain databases

InterProiIPR016357. Transferrin.
IPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view]
PfamiPF00405. Transferrin. 2 hits.
[Graphical view]
PIRSFiPIRSF002549. Transferrin. 1 hit.
PRINTSiPR00422. TRANSFERRIN.
SMARTiSM00094. TR_FER. 2 hits.
[Graphical view]
PROSITEiPS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 2 hits.
PS00207. TRANSFERRIN_LIKE_3. 2 hits.
PS51408. TRANSFERRIN_LIKE_4. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q921I1-1 [UniParc]FASTAAdd to Basket

« Hide

MRLTVGALLA CAALGLCLAV PDKTVKWCAV SEHENTKCIS FRDHMKTVLP    50
PDGPRLACVK KTSYPDCIKA ISASEADAMT LDGGWVYDAG LTPNNLKPVA 100
AEFYGSVEHP QTYYYAVAVV KKGTDFQLNQ LEGKKSCHTG LGRSAGWVIP 150
IGLLFCKLSE PRSPLEKAVS SFFSGSCVPC ADPVAFPKLC QLCPGCGCSS 200
TQPFFGYVGA FKCLKDGGGD VAFVKHTTIF EVLPEKADRD QYELLCLDNT 250
RKPVDQYEDC YLARIPSHAV VARKNNGKED LIWEILKVAQ EHFGKGKSKD 300
FQLFSSPLGK DLLFKDSAFG LLRVPPRMDY RLYLGHNYVT AIRNQQEGVC 350
PEGSIDNSPV KWCALSHLER TKCDEWSIIS EGKIECESAE TTEDCIEKIV 400
NGEADAMTLD GGHAYIAGQC GLVPVMAEYY ESSNCAIPSQ QGIFPKGYYA 450
VAVVKASDTS ITWNNLKGKK SCHTGVDRTA GWNIPMGMLY NRINHCKFDE 500
FFSQGCAPGY EKNSTLCDLC IGPLKCAPNN KEEYNGYTGA FRCLVEKGDV 550
AFVKHQTVLD NTEGKNPAEW AKNLKQEDFE LLCPDGTRKP VKDFASCHLA 600
QAPNHVVVSR KEKAARVKAV LTSQETLFGG SDCTGNFCLF KSTTKDLLFR 650
DDTKCFVKLP EGTTPEKYLG AEYMQSVGNM RKCSTSRLLE ACTFHKH 697
Length:697
Mass (Da):76,724
Last modified:December 1, 2001 - v1
Checksum:i0996A0C3B64CB1B9
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti3 – 42LT → FA in AAL34533. 1 Publication
Sequence conflicti69 – 691K → R in AAA40488. 1 Publication
Sequence conflicti71 – 744ISAS → HASG in AAH08559. 1 Publication
Sequence conflicti72 – 721S → A in AAA40488. 1 Publication
Sequence conflicti85 – 851W → L in AAA40488. 1 Publication
Sequence conflicti104 – 1041Y → C in AAA40488. 1 Publication
Sequence conflicti113 – 1131Y → S in AAA40488. 1 Publication
Sequence conflicti123 – 1242GT → ER in AAA40488. 1 Publication
Sequence conflicti135 – 1351K → E in BAE29847. 1 Publication
Sequence conflicti283 – 2831W → L in AAB28966. 1 Publication
Sequence conflicti307 – 3071P → L in AAB28966. 1 Publication
Sequence conflicti350 – 3512CP → SA in AAA39438. 1 Publication
Sequence conflicti487 – 4871G → C in AAA40490. 1 Publication
Sequence conflicti527 – 5271A → D in AAA40491. 1 Publication
Sequence conflicti529 – 5291N → S in BAE29847. 1 Publication
Sequence conflicti575 – 5751K → N in AAA40491. 1 Publication
Sequence conflicti697 – 6971H → S in AAL34533. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF440692 mRNA. Translation: AAL34533.1.
AK085754 mRNA. Translation: BAC39532.1.
AK142599 mRNA. Translation: BAE25124.1.
AK146549 mRNA. Translation: BAE27253.1.
AK149559 mRNA. Translation: BAE28960.1.
AK149595 mRNA. Translation: BAE28981.1.
AK150782 mRNA. Translation: BAE29847.1.
AK168419 mRNA. Translation: BAE40332.1.
AK168938 mRNA. Translation: BAE40747.1.
BC008559 mRNA. Translation: AAH08559.1.
BC012313 mRNA. Translation: AAH12313.1.
BC022986 mRNA. Translation: AAH22986.1.
BC092046 mRNA. Translation: AAH92046.1.
AF027336 Genomic DNA. Translation: AAB84034.1.
M23013 mRNA. Translation: AAA40488.1.
M23014 mRNA. Translation: AAA40489.1.
M23015 mRNA. Translation: AAA40490.1.
M23016 mRNA. Translation: AAA40491.1.
S67217 mRNA. Translation: AAB28966.2.
J03299 mRNA. Translation: AAA39438.1.
CCDSiCCDS23451.1.
PIRiA28446.
RefSeqiNP_598738.1. NM_133977.2.
UniGeneiMm.37214.

Genome annotation databases

EnsembliENSMUST00000035158; ENSMUSP00000035158; ENSMUSG00000032554.
ENSMUST00000112645; ENSMUSP00000108264; ENSMUSG00000032554.
GeneIDi22041.
KEGGimmu:22041.
UCSCiuc009rgi.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF440692 mRNA. Translation: AAL34533.1 .
AK085754 mRNA. Translation: BAC39532.1 .
AK142599 mRNA. Translation: BAE25124.1 .
AK146549 mRNA. Translation: BAE27253.1 .
AK149559 mRNA. Translation: BAE28960.1 .
AK149595 mRNA. Translation: BAE28981.1 .
AK150782 mRNA. Translation: BAE29847.1 .
AK168419 mRNA. Translation: BAE40332.1 .
AK168938 mRNA. Translation: BAE40747.1 .
BC008559 mRNA. Translation: AAH08559.1 .
BC012313 mRNA. Translation: AAH12313.1 .
BC022986 mRNA. Translation: AAH22986.1 .
BC092046 mRNA. Translation: AAH92046.1 .
AF027336 Genomic DNA. Translation: AAB84034.1 .
M23013 mRNA. Translation: AAA40488.1 .
M23014 mRNA. Translation: AAA40489.1 .
M23015 mRNA. Translation: AAA40490.1 .
M23016 mRNA. Translation: AAA40491.1 .
S67217 mRNA. Translation: AAB28966.2 .
J03299 mRNA. Translation: AAA39438.1 .
CCDSi CCDS23451.1.
PIRi A28446.
RefSeqi NP_598738.1. NM_133977.2.
UniGenei Mm.37214.

3D structure databases

ProteinModelPortali Q921I1.
SMRi Q921I1. Positions 20-694.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q921I1. 8 interactions.
MINTi MINT-1202663.

Protein family/group databases

MEROPSi S60.972.

PTM databases

PhosphoSitei Q921I1.

2D gel databases

REPRODUCTION-2DPAGE IPI00139788.
Q921I1.

Proteomic databases

MaxQBi Q921I1.
PaxDbi Q921I1.
PRIDEi Q921I1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000035158 ; ENSMUSP00000035158 ; ENSMUSG00000032554 .
ENSMUST00000112645 ; ENSMUSP00000108264 ; ENSMUSG00000032554 .
GeneIDi 22041.
KEGGi mmu:22041.
UCSCi uc009rgi.1. mouse.

Organism-specific databases

CTDi 22041.
MGIi MGI:98821. Trf.

Phylogenomic databases

eggNOGi NOG87503.
GeneTreei ENSGT00390000001619.
HOVERGENi HBG000055.
InParanoidi Q921I1.
KOi K14736.
OrthoDBi EOG7D59N7.
PhylomeDBi Q921I1.
TreeFami TF324013.

Enzyme and pathway databases

Reactomei REACT_198515. Transferrin endocytosis and recycling.
REACT_205755. Iron uptake and transport.

Miscellaneous databases

NextBioi 301824.
PROi Q921I1.
SOURCEi Search...

Gene expression databases

Bgeei Q921I1.
CleanExi MM_TRF.
Genevestigatori Q921I1.

Family and domain databases

InterProi IPR016357. Transferrin.
IPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view ]
Pfami PF00405. Transferrin. 2 hits.
[Graphical view ]
PIRSFi PIRSF002549. Transferrin. 1 hit.
PRINTSi PR00422. TRANSFERRIN.
SMARTi SM00094. TR_FER. 2 hits.
[Graphical view ]
PROSITEi PS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 2 hits.
PS00207. TRANSFERRIN_LIKE_3. 2 hits.
PS51408. TRANSFERRIN_LIKE_4. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Construction of a robust CHO cell-line for biopharmaceutical production."
    Lai D.-Z.
    Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: BALB/c.
    Tissue: Liver.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Amnion, Bone marrow, Liver and Mammary gland.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Liver and Mammary tumor.
  4. "Comparative sequence analysis of the mouse and human transferrin promoters: hormonal regulation of the transferrin promoter in Sertoli cells."
    Chaudhary J., Skinner M.K.
    Mol. Reprod. Dev. 50:273-283(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-11.
    Strain: BALB/c.
  5. "Transferrin mRNA level in the mouse mammary gland is regulated by pregnancy and extracellular matrix."
    Chen L.-H., Bissell M.J.
    J. Biol. Chem. 262:17247-17250(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 66-131; 277-337; 462-496 AND 526-575.
  6. "Transferrin gene expression in maternal liver, fetal liver and placenta during pregnancy in the mouse."
    Kasik J.W., Rice E.J.
    Placenta 14:365-371(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 268-307.
    Tissue: Placenta.
  7. "Lactotransferrin is the major estrogen inducible protein of mouse uterine secretions."
    Pentecost B.T., Teng C.T.
    J. Biol. Chem. 262:10134-10139(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 282-412.
  8. Lubec G., Klug S., Kang S.U.
    Submitted (APR-2007) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 332-343 AND 659-667, IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: C57BL/6.
    Tissue: Brain and Hippocampus.
  9. "Expression from the transferrin gene promoter in transgenic mice."
    Idzerda R.L., Behringer R.R., Theisen M., Huggenvik J.I., McKnight G.S., Brinster R.L.
    Mol. Cell. Biol. 9:5154-5162(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY.
  10. "Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides."
    Bernhard O.K., Kapp E.A., Simpson R.J.
    J. Proteome Res. 6:987-995(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-513.
    Strain: C57BL/6.
    Tissue: Plasma.

Entry informationi

Entry nameiTRFE_MOUSE
AccessioniPrimary (citable) accession number: Q921I1
Secondary accession number(s): O35421
, Q3UBW7, Q58E69, Q61803, Q62357, Q62358, Q62359, Q63915, Q64515, Q8VII5, Q922C0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 6, 2002
Last sequence update: December 1, 2001
Last modified: September 3, 2014
This is version 128 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi