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Protein
Submitted name:

Retinoic acid receptor

Gene

rara

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi74 – 149Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotationImported
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Retinoic acid receptorImported
Gene namesi
Name:raraImported
Synonyms:RARaImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-865415 rara

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ92019
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 149Nuclear receptorInterPro annotationAdd BLAST76

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG005606
KOiK08527

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR003078 Retinoic_acid_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR01292 RETNOICACIDR
PR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q92019-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYENVDVSPT HYHMMDFYSH NRQCLWPEKR INPYGTPLGT QHWSSSNHSI
60 70 80 90 100
ETQSTSSEEI VPSPPSPPPL PRIYKPCFVC QDKSSGYHYG VSACEGCKGF
110 120 130 140 150
FRRSIQKNMV YTCHRDKNCI INKVTRNRCQ YCRLQKCFEV GMSKESVRND
160 170 180 190 200
RNKKKKEPPK VDVMESYVLS PETQDLIEKV RKAHKETFPA LCQLGKYTTN
210 220 230 240 250
FSSEERVSLD IDLWDKFSEL STKCIIKTVE FAKQLPGFTT LTIADQITLL
260 270 280 290 300
KSACLDILIL RICTRYTPDQ DTMTFSDGLT LNRTQMHNAG FGPLTDLVFA
310 320 330 340 350
FANQLLPLEM DDAETGLLSA ICLICGDRQD LEQPDKVDKL QEPLLEALKI
360 370 380 390 400
YVRNRRPKKP HMFPKMLMKI TDLRSISAKG AERVITLKME IPGSMPPLIQ
410 420 430 440
EMLENSEGLD TLGGGASSQT PVTPVAPGSC SPSLSPSSTH SSPSSHSP
Length:448
Mass (Da):50,456
Last modified:November 1, 1996 - v1
Checksum:i6CF94B31BC57054B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87365 mRNA Translation: CAA60791.1
PIRiA56558
B56558
RefSeqiNP_001083723.1, NM_001090254.1
UniGeneiXl.158

Genome annotation databases

GeneIDi399081
KEGGixla:399081

Similar proteinsi

Entry informationi

Entry nameiQ92019_XENLA
AccessioniPrimary (citable) accession number: Q92019
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health