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Protein

Coronin-1A

Gene

Coro1a

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

May be a crucial component of the cytoskeleton of highly motile cells, functioning both in the invagination of large pieces of plasma membrane, as well as in forming protrusions of the plasma membrane involved in cell locomotion.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Actin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Coronin-1A
Alternative name(s):
Coronin-like protein A
Short name:
Clipin-A
Tryptophan aspartate-containing coat protein
Short name:
TACO
Gene namesi
Name:Coro1a
Synonyms:Coro1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi620009. Coro1a.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoplasmic vesicle, Cytoskeleton, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 461460Coronin-1APRO_0000270800Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylserineBy similarity
Modified residuei2 – 21Phosphoserine; by PKCBy similarity
Modified residuei412 – 4121Phosphoserine; by PKCBy similarity
Modified residuei418 – 4181PhosphothreonineCombined sources
Modified residuei422 – 4221PhosphoserineBy similarity

Post-translational modificationi

phosphorylation at Ser-412 by PKC strongly down-regulates the association with actin.By similarity
Polyubiquitinated by RNF128 with 'Lys-48'-linked chains, leading to proteasomal degradation.By similarity

Keywords - PTMi

Acetylation, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ91ZN1.
PRIDEiQ91ZN1.

2D gel databases

World-2DPAGE0004:Q91ZN1.

PTM databases

iPTMnetiQ91ZN1.
PhosphoSiteiQ91ZN1.

Expressioni

Gene expression databases

GenevisibleiQ91ZN1. RN.

Interactioni

Subunit structurei

Binds actin.By similarity

Protein-protein interaction databases

BioGridi250886. 1 interaction.
STRINGi10116.ENSRNOP00000026496.

Structurei

3D structure databases

ProteinModelPortaliQ91ZN1.
SMRiQ91ZN1. Positions 9-394, 430-461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati13 – 6351WD 1Add
BLAST
Repeati73 – 11038WD 2Add
BLAST
Repeati123 – 16038WD 3Add
BLAST
Repeati164 – 20441WD 4Add
BLAST
Repeati207 – 25145WD 5Add
BLAST
Repeati258 – 29639WD 6Add
BLAST
Repeati302 – 34948WD 7Add
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili425 – 46137Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the WD repeat coronin family.Curated
Contains 7 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Repeat, WD repeat

Phylogenomic databases

eggNOGiKOG0303. Eukaryota.
ENOG410XQAD. LUCA.
GeneTreeiENSGT00760000119195.
HOGENOMiHOG000166356.
HOVERGENiHBG059978.
InParanoidiQ91ZN1.
KOiK13882.
OMAiFMALICE.
OrthoDBiEOG7J70FB.
PhylomeDBiQ91ZN1.
TreeFamiTF314280.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR029508. CORO1A.
IPR015505. Coronin.
IPR015048. DUF1899.
IPR015049. Trimer_CC.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PANTHERiPTHR10856. PTHR10856. 1 hit.
PTHR10856:SF18. PTHR10856:SF18. 1 hit.
PfamiPF08953. DUF1899. 1 hit.
PF08954. Trimer_CC. 1 hit.
PF00400. WD40. 3 hits.
[Graphical view]
SMARTiSM01166. DUF1899. 1 hit.
SM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q91ZN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRQVVRSSK FRHVFGQPAK ADQCYEDVRV SQTTWDSGFC AVNPKFMALI
60 70 80 90 100
CEASGGGAFL VLPLGKTGRV DKNVPLVCGH TAPVLDIAWC PHNDNVIASG
110 120 130 140 150
SEDCTVMVWE IPDGGLVLPL REPVVTLEGH TKRVGIVAWH PTAQNVLLSA
160 170 180 190 200
GCDNVILVWD VGTGAAVLTL GPDVHPDTIY SVDWSRDGAL ICTSCRDKRV
210 220 230 240 250
RVIEPRKGTV VAEKERPHEG TRPVHAVFVS EGKILTTGFS RMSERQVALW
260 270 280 290 300
DTKHLEEPLS LQELDTSSGV LLPFFDPDTN IVYLCGKGDS SIRYFEITSE
310 320 330 340 350
APFLHYLSMF SSKESQRGMG YMPKRGLEVN KCEIARFYKL HERKCEPIAM
360 370 380 390 400
TVPRKSDLFQ EDLYPPTAGP DPALTAEEWL SGRDAGPLLI SLKDGYVPPK
410 420 430 440 450
SRELRVNRGL DSARRRATPE PSSTLSSDTV SRLEEDVRNL NAIVQKLQER
460
LDRLEETVQA K
Length:461
Mass (Da):51,065
Last modified:January 23, 2007 - v3
Checksum:iEE1094B3CF302000
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF416730 mRNA. Translation: AAL18695.1.
AF495469 mRNA. Translation: AAM18515.1.
BC086971 mRNA. Translation: AAH86971.1.
RefSeqiNP_569095.1. NM_130411.2.
XP_006230266.1. XM_006230204.2.
UniGeneiRn.6990.

Genome annotation databases

EnsembliENSRNOT00000026496; ENSRNOP00000026496; ENSRNOG00000019430.
GeneIDi155151.
KEGGirno:155151.
UCSCiRGD:620009. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF416730 mRNA. Translation: AAL18695.1.
AF495469 mRNA. Translation: AAM18515.1.
BC086971 mRNA. Translation: AAH86971.1.
RefSeqiNP_569095.1. NM_130411.2.
XP_006230266.1. XM_006230204.2.
UniGeneiRn.6990.

3D structure databases

ProteinModelPortaliQ91ZN1.
SMRiQ91ZN1. Positions 9-394, 430-461.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi250886. 1 interaction.
STRINGi10116.ENSRNOP00000026496.

PTM databases

iPTMnetiQ91ZN1.
PhosphoSiteiQ91ZN1.

2D gel databases

World-2DPAGE0004:Q91ZN1.

Proteomic databases

PaxDbiQ91ZN1.
PRIDEiQ91ZN1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000026496; ENSRNOP00000026496; ENSRNOG00000019430.
GeneIDi155151.
KEGGirno:155151.
UCSCiRGD:620009. rat.

Organism-specific databases

CTDi11151.
RGDi620009. Coro1a.

Phylogenomic databases

eggNOGiKOG0303. Eukaryota.
ENOG410XQAD. LUCA.
GeneTreeiENSGT00760000119195.
HOGENOMiHOG000166356.
HOVERGENiHBG059978.
InParanoidiQ91ZN1.
KOiK13882.
OMAiFMALICE.
OrthoDBiEOG7J70FB.
PhylomeDBiQ91ZN1.
TreeFamiTF314280.

Miscellaneous databases

PROiQ91ZN1.

Gene expression databases

GenevisibleiQ91ZN1. RN.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR029508. CORO1A.
IPR015505. Coronin.
IPR015048. DUF1899.
IPR015049. Trimer_CC.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PANTHERiPTHR10856. PTHR10856. 1 hit.
PTHR10856:SF18. PTHR10856:SF18. 1 hit.
PfamiPF08953. DUF1899. 1 hit.
PF08954. Trimer_CC. 1 hit.
PF00400. WD40. 3 hits.
[Graphical view]
SMARTiSM01166. DUF1899. 1 hit.
SM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning of rat Coro1a."
    Suzuki K., Takeshita F., Nakata N., Makino M.
    Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Sprague-Dawley.
    Tissue: Spleen.
  2. "A new therapeutic strategy of mycobacterium infection by use of anti-TACO sequence."
    Kohchi C., Inagawa H., Makino K., Terada H., Soma G.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Fischer 344.
    Tissue: Brain.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.
  4. Lubec G., Afjehi-Sadat L., Chen W.-Q.
    Submitted (APR-2007) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 21-66; 187-196; 215-233; 344-354; 384-393; 417-432 AND 439-446, IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: Sprague-Dawley.
    Tissue: Hippocampus and Spinal cord.
  5. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-418, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiCOR1A_RAT
AccessioniPrimary (citable) accession number: Q91ZN1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 23, 2007
Last modified: June 8, 2016
This is version 109 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.