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Protein

E3 ubiquitin-protein ligase RNF185

Gene

Rnf185

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

E3 ubiquitin-protein ligase that regulates selective mitochondrial autophagy by mediating 'Lys-63'-linked polyubiquitination of BNIP1. Responsible for the cotranslational ubiquitination and degradation of CFTR in the ERAD pathway. Preferentially associates with the E2 enzymes UBE2J1 and UBE2J2 (By similarity).By similarity

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 80RING-typePROSITE-ProRule annotationAdd BLAST42

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

Autophagy, Ubl conjugation pathway

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-MMU-382556. ABC-family proteins mediated transport.
R-MMU-901032. ER Quality Control Compartment (ERQC).
UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
E3 ubiquitin-protein ligase RNF185 (EC:6.3.2.-)
Alternative name(s):
RING finger protein 185
Gene namesi
Name:Rnf185
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1922078. Rnf185.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 130CytoplasmicAdd BLAST130
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Topological domaini152 – 171Mitochondrial intermembraneAdd BLAST20
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane, Mitochondrion, Mitochondrion outer membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002475211 – 192E3 ubiquitin-protein ligase RNF185Add BLAST192

Proteomic databases

PaxDbiQ91YT2.
PeptideAtlasiQ91YT2.
PRIDEiQ91YT2.

PTM databases

iPTMnetiQ91YT2.
PhosphoSitePlusiQ91YT2.

Expressioni

Gene expression databases

BgeeiENSMUSG00000020448.
CleanExiMM_RNF185.
GenevisibleiQ91YT2. MM.

Interactioni

Subunit structurei

Interacts with ATG5 and BNIP1.By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000067053.

Structurei

3D structure databases

ProteinModelPortaliQ91YT2.
SMRiQ91YT2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domaini

The RING-type zinc finger domain is responsible for E3 ubiquitin ligase activity.By similarity

Sequence similaritiesi

Contains 1 RING-type zinc finger.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 80RING-typePROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

Transmembrane, Transmembrane helix, Zinc-finger

Phylogenomic databases

eggNOGiKOG0823. Eukaryota.
ENOG4111IHV. LUCA.
GeneTreeiENSGT00390000014107.
HOGENOMiHOG000238304.
HOVERGENiHBG054495.
InParanoidiQ91YT2.
KOiK10666.
OMAiQAAMASK.
OrthoDBiEOG091G0W2I.
PhylomeDBiQ91YT2.
TreeFamiTF317334.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q91YT2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASKGPSASA STENSNAGGP SGSSNGTGES GGQDSTFECN ICLDTAKDAV
60 70 80 90 100
ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ
110 120 130 140 150
DPREKTPPRP QGQRPEPENR GGFQGFGFGD GGFQMSFGIG AFPFGIFATA
160 170 180 190
FNINDGRPPP AVPGTPQYVD EQFLSRLFLF VALVIMFWLL IA
Length:192
Mass (Da):20,520
Last modified:December 1, 2001 - v1
Checksum:i12B98A1DA309AD5D
GO
Isoform 2 (identifier: Q91YT2-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1: M → MCILLCPHMFCRPINQRQADWDCLENLPWKLCWQAAM

Note: No experimental confirmation available.
Show »
Length:228
Mass (Da):24,850
Checksum:i82C8361BB09B1DE4
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0200051M → MCILLCPHMFCRPINQRQAD WDCLENLPWKLCWQAAM in isoform 2. 1 Publication1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034108 mRNA. Translation: BAC28589.1.
AK052436 mRNA. Translation: BAC34989.1.
AK053358 mRNA. Translation: BAC35361.1.
AK075756 mRNA. Translation: BAC35934.1.
AK077638 mRNA. Translation: BAC36918.1.
AK149640 mRNA. Translation: BAE29001.1.
AK165895 mRNA. Translation: BAE38444.1.
AK167455 mRNA. Translation: BAE39541.1.
AK168904 mRNA. Translation: BAE40718.1.
BC014812 mRNA. Translation: AAH14812.1.
CCDSiCCDS24361.1. [Q91YT2-2]
CCDS70127.1. [Q91YT2-1]
RefSeqiNP_001277401.1. NM_001290472.1. [Q91YT2-1]
NP_001277402.1. NM_001290473.1.
NP_663330.2. NM_145355.5. [Q91YT2-2]
UniGeneiMm.136973.

Genome annotation databases

EnsembliENSMUST00000064364; ENSMUSP00000067053; ENSMUSG00000020448. [Q91YT2-2]
ENSMUST00000077078; ENSMUSP00000076333; ENSMUSG00000020448. [Q91YT2-1]
GeneIDi193670.
KEGGimmu:193670.
UCSCiuc007hsv.2. mouse. [Q91YT2-2]
uc007hsw.2. mouse. [Q91YT2-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034108 mRNA. Translation: BAC28589.1.
AK052436 mRNA. Translation: BAC34989.1.
AK053358 mRNA. Translation: BAC35361.1.
AK075756 mRNA. Translation: BAC35934.1.
AK077638 mRNA. Translation: BAC36918.1.
AK149640 mRNA. Translation: BAE29001.1.
AK165895 mRNA. Translation: BAE38444.1.
AK167455 mRNA. Translation: BAE39541.1.
AK168904 mRNA. Translation: BAE40718.1.
BC014812 mRNA. Translation: AAH14812.1.
CCDSiCCDS24361.1. [Q91YT2-2]
CCDS70127.1. [Q91YT2-1]
RefSeqiNP_001277401.1. NM_001290472.1. [Q91YT2-1]
NP_001277402.1. NM_001290473.1.
NP_663330.2. NM_145355.5. [Q91YT2-2]
UniGeneiMm.136973.

3D structure databases

ProteinModelPortaliQ91YT2.
SMRiQ91YT2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000067053.

PTM databases

iPTMnetiQ91YT2.
PhosphoSitePlusiQ91YT2.

Proteomic databases

PaxDbiQ91YT2.
PeptideAtlasiQ91YT2.
PRIDEiQ91YT2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000064364; ENSMUSP00000067053; ENSMUSG00000020448. [Q91YT2-2]
ENSMUST00000077078; ENSMUSP00000076333; ENSMUSG00000020448. [Q91YT2-1]
GeneIDi193670.
KEGGimmu:193670.
UCSCiuc007hsv.2. mouse. [Q91YT2-2]
uc007hsw.2. mouse. [Q91YT2-1]

Organism-specific databases

CTDi91445.
MGIiMGI:1922078. Rnf185.

Phylogenomic databases

eggNOGiKOG0823. Eukaryota.
ENOG4111IHV. LUCA.
GeneTreeiENSGT00390000014107.
HOGENOMiHOG000238304.
HOVERGENiHBG054495.
InParanoidiQ91YT2.
KOiK10666.
OMAiQAAMASK.
OrthoDBiEOG091G0W2I.
PhylomeDBiQ91YT2.
TreeFamiTF317334.

Enzyme and pathway databases

UniPathwayiUPA00143.
ReactomeiR-MMU-382556. ABC-family proteins mediated transport.
R-MMU-901032. ER Quality Control Compartment (ERQC).

Miscellaneous databases

ChiTaRSiRnf185. mouse.
PROiQ91YT2.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000020448.
CleanExiMM_RNF185.
GenevisibleiQ91YT2. MM.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiIPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
[Graphical view]
SMARTiSM00184. RING. 1 hit.
[Graphical view]
PROSITEiPS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRN185_MOUSE
AccessioniPrimary (citable) accession number: Q91YT2
Secondary accession number(s): Q6ZWS3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 25, 2006
Last sequence update: December 1, 2001
Last modified: November 2, 2016
This is version 115 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.