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Protein

E3 ubiquitin-protein ligase RNF185

Gene

Rnf185

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

E3 ubiquitin-protein ligase that regulates selective mitochondrial autophagy by mediating 'Lys-63'-linked polyubiquitination of BNIP1. Acts in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway, which targets misfolded proteins that accumulate in the endoplasmic reticulum (ER) for ubiquitination and subsequent proteasome-mediated degradation. Protects cells from ER stress-induced apoptosis. Responsible for the cotranslational ubiquitination and degradation of CFTR in the ERAD pathway. Preferentially associates with the E2 enzymes UBE2J1 and UBE2J2 (By similarity).By similarity

Catalytic activityi

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6-ubiquitinyl-[acceptor protein]-L-lysine.By similarity

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 80RING-typePROSITE-ProRule annotationAdd BLAST42

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransferase
Biological processAutophagy, Ubl conjugation pathway
LigandMetal-binding, Zinc

Enzyme and pathway databases

UniPathwayiUPA00143

Names & Taxonomyi

Protein namesi
Recommended name:
E3 ubiquitin-protein ligase RNF185 (EC:2.3.2.27By similarity)
Alternative name(s):
RING finger protein 185
RING-type E3 ubiquitin transferase RNF185Curated
Gene namesi
Name:Rnf185
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:1922078 Rnf185

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 130CytoplasmicAdd BLAST130
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Topological domaini152 – 171Mitochondrial intermembraneAdd BLAST20
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane, Mitochondrion, Mitochondrion outer membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002475211 – 192E3 ubiquitin-protein ligase RNF185Add BLAST192

Proteomic databases

PaxDbiQ91YT2
PeptideAtlasiQ91YT2
PRIDEiQ91YT2

PTM databases

iPTMnetiQ91YT2
PhosphoSitePlusiQ91YT2

Expressioni

Tissue specificityi

Ubiquitously expressed with high expression in testis.1 Publication

Gene expression databases

BgeeiENSMUSG00000020448
CleanExiMM_RNF185
GenevisibleiQ91YT2 MM

Interactioni

Subunit structurei

Interacts with ATG5 and BNIP1.By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi228751, 1 interactor
STRINGi10090.ENSMUSP00000067053

Structurei

3D structure databases

ProteinModelPortaliQ91YT2
SMRiQ91YT2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni29 – 80Required for ubiquitin ligase activity and protection against ER stress-induced cell deathBy similarityAdd BLAST52

Domaini

The RING-type zinc finger domain is responsible for E3 ubiquitin ligase activity.By similarity

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri39 – 80RING-typePROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

Transmembrane, Transmembrane helix, Zinc-finger

Phylogenomic databases

eggNOGiKOG0823 Eukaryota
ENOG4111IHV LUCA
GeneTreeiENSGT00390000014107
HOGENOMiHOG000238304
HOVERGENiHBG054495
InParanoidiQ91YT2
KOiK10666
OMAiCIFQWLQ
OrthoDBiEOG091G0W2I
PhylomeDBiQ91YT2
TreeFamiTF317334

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q91YT2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASKGPSASA STENSNAGGP SGSSNGTGES GGQDSTFECN ICLDTAKDAV
60 70 80 90 100
ISLCGHLFCW PCLHQWLETR PNRQVCPVCK AGISRDKVIP LYGRGSTGQQ
110 120 130 140 150
DPREKTPPRP QGQRPEPENR GGFQGFGFGD GGFQMSFGIG AFPFGIFATA
160 170 180 190
FNINDGRPPP AVPGTPQYVD EQFLSRLFLF VALVIMFWLL IA
Length:192
Mass (Da):20,520
Last modified:December 1, 2001 - v1
Checksum:i12B98A1DA309AD5D
GO
Isoform 2 (identifier: Q91YT2-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1: M → MCILLCPHMFCRPINQRQADWDCLENLPWKLCWQAAM

Note: No experimental confirmation available.
Show »
Length:228
Mass (Da):24,850
Checksum:i82C8361BB09B1DE4
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0200051M → MCILLCPHMFCRPINQRQAD WDCLENLPWKLCWQAAM in isoform 2. 1 Publication1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034108 mRNA Translation: BAC28589.1
AK052436 mRNA Translation: BAC34989.1
AK053358 mRNA Translation: BAC35361.1
AK075756 mRNA Translation: BAC35934.1
AK077638 mRNA Translation: BAC36918.1
AK149640 mRNA Translation: BAE29001.1
AK165895 mRNA Translation: BAE38444.1
AK167455 mRNA Translation: BAE39541.1
AK168904 mRNA Translation: BAE40718.1
BC014812 mRNA Translation: AAH14812.1
CCDSiCCDS24361.1 [Q91YT2-2]
CCDS70127.1 [Q91YT2-1]
RefSeqiNP_001277401.1, NM_001290472.1 [Q91YT2-1]
NP_001277402.1, NM_001290473.1
NP_663330.2, NM_145355.5 [Q91YT2-2]
UniGeneiMm.136973

Genome annotation databases

EnsembliENSMUST00000064364; ENSMUSP00000067053; ENSMUSG00000020448 [Q91YT2-2]
ENSMUST00000077078; ENSMUSP00000076333; ENSMUSG00000020448 [Q91YT2-1]
GeneIDi193670
KEGGimmu:193670
UCSCiuc007hsv.2 mouse [Q91YT2-2]
uc007hsw.2 mouse [Q91YT2-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiRN185_MOUSE
AccessioniPrimary (citable) accession number: Q91YT2
Secondary accession number(s): Q6ZWS3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 25, 2006
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways

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