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Q91YK2

- RRP1B_MOUSE

UniProt

Q91YK2 - RRP1B_MOUSE

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Protein

Ribosomal RNA processing protein 1 homolog B

Gene

Rrp1b

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. poly(A) RNA binding Source: Ensembl

GO - Biological processi

  1. negative regulation of phosphatase activity Source: UniProtKB
  2. rRNA processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA processing protein 1 homolog B
Alternative name(s):
RRP1-like protein B
Gene namesi
Name:Rrp1b
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 17

Organism-specific databases

MGIiMGI:1919712. Rrp1b.

Subcellular locationi

Nucleusnucleolus By similarity

GO - Cellular componenti

  1. cytosol Source: Ensembl
  2. euchromatin Source: MGI
  3. heterochromatin Source: MGI
  4. nucleolus Source: Ensembl
  5. nucleus Source: MGI
  6. preribosome, small subunit precursor Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 724724Ribosomal RNA processing protein 1 homolog BPRO_0000340116Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei336 – 3361PhosphoserineBy similarity
Modified residuei370 – 3701PhosphoserineBy similarity
Modified residuei432 – 4321PhosphoserineBy similarity
Modified residuei438 – 4381PhosphoserineBy similarity
Modified residuei494 – 4941PhosphoserineBy similarity
Modified residuei618 – 6181N6-acetyllysineBy similarity
Modified residuei668 – 6681PhosphoserineBy similarity
Modified residuei672 – 6721PhosphoserineBy similarity
Modified residuei678 – 6781Citrulline1 Publication
Modified residuei694 – 6941PhosphothreonineBy similarity
Modified residuei698 – 6981PhosphoserineBy similarity
Modified residuei701 – 7011PhosphoserineBy similarity

Post-translational modificationi

Citrullinated by PADI4.1 Publication

Keywords - PTMi

Acetylation, Citrullination, Phosphoprotein

Proteomic databases

MaxQBiQ91YK2.
PaxDbiQ91YK2.
PRIDEiQ91YK2.

PTM databases

PhosphoSiteiQ91YK2.

Expressioni

Gene expression databases

BgeeiQ91YK2.
ExpressionAtlasiQ91YK2. baseline and differential.
GenevestigatoriQ91YK2.

Interactioni

Protein-protein interaction databases

BioGridi215383. 45 interactions.
IntActiQ91YK2. 2 interactions.
MINTiMINT-4121923.

Structurei

3D structure databases

ProteinModelPortaliQ91YK2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RRP1 family.Curated

Phylogenomic databases

eggNOGiNOG299406.
GeneTreeiENSGT00390000011821.
HOGENOMiHOG000070179.
HOVERGENiHBG098014.
InParanoidiQ91YK2.
KOiK14849.
OMAiMTAEFKK.
OrthoDBiEOG718KC8.
PhylomeDBiQ91YK2.
TreeFamiTF315294.

Family and domain databases

InterProiIPR010301. Nop52.
[Graphical view]
PANTHERiPTHR13026. PTHR13026. 1 hit.
PfamiPF05997. Nop52. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q91YK2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALAMQSSEF QFAQRLASSE KGVRDRAVRK LRQYLSARTQ SDTGSFSQEE
60 70 80 90 100
LLKIWKGLFY CMWVQDEPLL QEELANIISQ LIHVVNSLEA QYLFIQTFWQ
110 120 130 140 150
TMNREWQGID KLQLDKYYML IRLVLRQSFE VLKRNAWEES QITLFLDILM
160 170 180 190 200
KEILSPESQS PNGVRTHLID VYLEELTTVG GAELLADQNL KLIDPFCRIA
210 220 230 240 250
AKTKDHTLVQ TVARGVFEVI VDQSACVPQE SVEERKTKED GSGFPTKALA
260 270 280 290 300
CRKAVSGKKA ALDECLRDGV IGSRERDICA ALKDSGSPLQ FDYKAVADRL
310 320 330 340 350
LEIANSKSTP PFNRKRLCRL VRKFQDLCEG NGAPLSSAED NGQRRHKRKR
360 370 380 390 400
KKLLESEKGD TVSPAAEEDS GGHIHKKKRK KRKRSHFQPD TQNLDAVAVP
410 420 430 440 450
KVPDSESEPD TAQRQAPCGQ ACVTEPTAEA VSSIGENSSK PTPVMPIHNK
460 470 480 490 500
RKRPRKKKLR AHKEICKSTT LPQEDMSKND AVSGHSQSSA AHISSSEGVQ
510 520 530 540 550
AQKRKRKLGA LPDSSSDLPV QKSGTPTSPV EGKDGQTTLP RCKRSQKKTA
560 570 580 590 600
SSTLDPCDPS SQKPAISKKK KKTMKLMSNG VLESNPGQIQ ALGSNRTLKK
610 620 630 640 650
PLKTEDDFVK FDTRFLPKPL FFRKAKNSSA TRPQGPAGQL NKTPSSSKKV
660 670 680 690 700
TFGLNRNMTA EFKKTDKSIL VSPTGLSRVA FNPEQRPLHG VLKTATSSPA
710 720
STPLSPMRLP ATTPKRRPRA ADFF
Length:724
Mass (Da):80,582
Last modified:June 10, 2008 - v2
Checksum:i4DEFC78AADBA38F1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti209 – 2091V → A in AAH16569. (PubMed:15489334)Curated
Sequence conflicti229 – 2291Q → E in AAH16569. (PubMed:15489334)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT033797 Genomic DNA. Translation: CAQ11869.1.
BC016569 mRNA. Translation: AAH16569.1.
CCDSiCCDS28613.1.
RefSeqiNP_082520.2. NM_028244.2.
UniGeneiMm.102761.

Genome annotation databases

EnsembliENSMUST00000081339; ENSMUSP00000080085; ENSMUSG00000058392.
GeneIDi72462.
KEGGimmu:72462.
UCSCiuc008bvt.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT033797 Genomic DNA. Translation: CAQ11869.1 .
BC016569 mRNA. Translation: AAH16569.1 .
CCDSi CCDS28613.1.
RefSeqi NP_082520.2. NM_028244.2.
UniGenei Mm.102761.

3D structure databases

ProteinModelPortali Q91YK2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 215383. 45 interactions.
IntActi Q91YK2. 2 interactions.
MINTi MINT-4121923.

PTM databases

PhosphoSitei Q91YK2.

Proteomic databases

MaxQBi Q91YK2.
PaxDbi Q91YK2.
PRIDEi Q91YK2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000081339 ; ENSMUSP00000080085 ; ENSMUSG00000058392 .
GeneIDi 72462.
KEGGi mmu:72462.
UCSCi uc008bvt.2. mouse.

Organism-specific databases

CTDi 23076.
MGIi MGI:1919712. Rrp1b.

Phylogenomic databases

eggNOGi NOG299406.
GeneTreei ENSGT00390000011821.
HOGENOMi HOG000070179.
HOVERGENi HBG098014.
InParanoidi Q91YK2.
KOi K14849.
OMAi MTAEFKK.
OrthoDBi EOG718KC8.
PhylomeDBi Q91YK2.
TreeFami TF315294.

Miscellaneous databases

NextBioi 336284.
PROi Q91YK2.
SOURCEi Search...

Gene expression databases

Bgeei Q91YK2.
ExpressionAtlasi Q91YK2. baseline and differential.
Genevestigatori Q91YK2.

Family and domain databases

InterProi IPR010301. Nop52.
[Graphical view ]
PANTHERi PTHR13026. PTHR13026. 1 hit.
Pfami PF05997. Nop52. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Mammary tumor.
  3. Cited for: CITRULLINATION AT ARG-678.

Entry informationi

Entry nameiRRP1B_MOUSE
AccessioniPrimary (citable) accession number: Q91YK2
Secondary accession number(s): B0V2W7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: November 26, 2014
This is version 87 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3