Q91WY5 (Q91WY5_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Zinc finger transcription factor GLI3 EMBL BAB71724.1

Gene names

Name:

Gli3 RGD 620272

Organism

Rattus norvegicus (Rat) EMBL BAB71724.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	109 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	anterior semicircular canal development Inferred from electronic annotation. Source: Compara anterior/posterior pattern specification Inferred from electronic annotation. Source: Compara artery development Inferred from electronic annotation. Source: Compara axon guidance Inferred from electronic annotation. Source: Compara branching involved in ureteric bud morphogenesis Inferred from electronic annotation. Source: Compara camera-type eye morphogenesis Inferred from electronic annotation. Source: Compara cell differentiation involved in kidney development Inferred from electronic annotation. Source: Compara cerebral cortex radial glia guided migration Inferred from electronic annotation. Source: Compara developmental growth Inferred from electronic annotation. Source: Compara embryonic digestive tract morphogenesis Inferred from electronic annotation. Source: Compara embryonic digit morphogenesis Inferred from electronic annotation. Source: Compara embryonic skeletal system morphogenesis Inferred from electronic annotation. Source: Compara forebrain dorsal/ventral pattern formation Inferred from electronic annotation. Source: Compara forebrain radial glial cell differentiation Inferred from electronic annotation. Source: Compara frontal suture morphogenesis Inferred from electronic annotation. Source: Compara heart development Inferred from electronic annotation. Source: Compara hindgut morphogenesis Inferred from electronic annotation. Source: Compara in utero embryonic development Inferred from electronic annotation. Source: Compara lambdoid suture morphogenesis Inferred from electronic annotation. Source: Compara lateral ganglionic eminence cell proliferation Inferred from electronic annotation. Source: Compara lateral semicircular canal development Inferred from electronic annotation. Source: Compara lung development Inferred from electronic annotation. Source: Compara mammary gland specification Inferred from electronic annotation. Source: Compara melanocyte differentiation Inferred from electronic annotation. Source: Compara metanephros development Inferred from electronic annotation. Source: Compara multicellular organismal development Traceable author statement PubMed 15328011. Source: RGD negative regulation of alpha-beta T cell differentiation Inferred from electronic annotation. Source: Compara negative regulation of apoptotic process Inferred from electronic annotation. Source: Compara negative regulation of canonical Wnt receptor signaling pathway Inferred from electronic annotation. Source: Compara negative regulation of cell proliferation Inferred from electronic annotation. Source: Compara negative regulation of neuron differentiation Inferred from electronic annotation. Source: Compara negative regulation of smoothened signaling pathway Inferred from electronic annotation. Source: Compara negative regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara negative thymic T cell selection Inferred from electronic annotation. Source: Compara odontogenesis of dentin-containing tooth Inferred from electronic annotation. Source: Compara oligodendrocyte differentiation Inferred from electronic annotation. Source: Compara optic nerve morphogenesis Inferred from electronic annotation. Source: Compara palate development Inferred from electronic annotation. Source: Compara positive regulation of alpha-beta T cell differentiation Inferred from electronic annotation. Source: Compara positive regulation of chondrocyte differentiation Inferred from electronic annotation. Source: Compara positive regulation of neuroblast proliferation Inferred from electronic annotation. Source: Compara positive regulation of osteoblast differentiation Inferred from electronic annotation. Source: Compara positive regulation of protein import into nucleus Inferred from electronic annotation. Source: Compara positive regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara protein processing Inferred from electronic annotation. Source: Compara proximal/distal pattern formation Inferred from electronic annotation. Source: Compara response to estrogen stimulus Inferred from expression pattern PubMed 15328011. Source: RGD sagittal suture morphogenesis Inferred from electronic annotation. Source: Compara smoothened signaling pathway Traceable author statement PubMed 15328011. Source: RGD smoothened signaling pathway involved in dorsal/ventral neural tube patterning Inferred from electronic annotation. Source: Compara smoothened signaling pathway involved in spinal cord motor neuron cell fate specification Inferred from electronic annotation. Source: Compara smoothened signaling pathway involved in ventral spinal cord interneuron specification Inferred from electronic annotation. Source: Compara thymocyte apoptotic process Inferred from electronic annotation. Source: Compara tongue development Inferred from electronic annotation. Source: Compara wound healing Inferred from expression pattern PubMed 15277480. Source: RGD
Cellular_component	cilium Inferred from electronic annotation. Source: Compara cytosol Inferred from electronic annotation. Source: Compara mediator complex Inferred from electronic annotation. Source: Compara nucleolus Inferred from electronic annotation. Source: Compara transcriptional repressor complex Inferred from electronic annotation. Source: Compara
Molecular_function	chromatin binding Inferred from electronic annotation. Source: Compara sequence-specific DNA binding Inferred from electronic annotation. Source: Compara sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAB71724.1
	Non-terminal residue	109	1	EMBL BAB71724.1

Sequences

	Sequence		Length	Mass (Da)
	Q91WY5 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 6841EDC151A7F353	FASTA	109	12,011
	10 20 30 40 50 60 AESSIAKCPT RTDVSEKAVA SSTTSNEDES AGQIYHRERR NAITMQPQSV QGLSKISEEP 70 80 90 100 STSSDERASL IKKEIHGSLP HLAEPSLPYR GTVFAMDPRN GYMEPHYHP

References

[1]	"Partial cDNA sequence amplified by RT-PCR." Kataoka H., Enomoto K. Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Wistar EMBL BAB71724.1. Tissue: E18 whole embryo EMBL BAB71724.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB073718 mRNA. Translation: BAB71724.1.
IPI	IPI00765774.
UniGene	Rn.199034.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000019396.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	RGD:620272. rat.
Organism-specific databases
RGD	620272. Gli3.
Phylogenomic databases
eggNOG	COG5048.
InParanoid	Q91WY5.
Gene expression databases
Genevestigator	Q91WY5.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Q91WY5_RAT

Accession

Primary (citable) accession number: Q91WY5

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	April 3, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)