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Unreviewed, UniProtKB/TrEMBL Q91WX8 (Q91WX8_RAT)

Last modified January 19, 2010. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Voltage-gated calcium channel pore forming subunit CaV1.3alpha1 EMBL AAK72960.1
Gene names
Name: Cacna1d RGD 70973
OrganismRattus norvegicus (Rat) EMBL AAK72960.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

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Protein attributes

Sequence length695 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAK72960.1

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Sequences

Sequence LengthMass (Da)Tools
Q91WX8-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: B9A5A1CE11FB7D32

FASTA69579,034
        10         20         30         40         50         60 
DNFDYLTRDW SILGPHHLDE FKRIWSEYDP EAKGRIKHLD VVTLLRRIQP PLGFGKLCPH 

        70         80         90        100        110        120 
RVACKRLVAM NMPLNSDGTV MFNATLFALV RTALKIKTEG NLEQANEELR AVIKKIWKKT 

       130        140        150        160        170        180 
SMKLLDQVVP PAGDDEVTVG KFYATFLIQD YFRKFKKRKE QGLVGKYPAK NTTIALQAGL 

       190        200        210        220        230        240 
RTLHDIGPEI RRAISCDLQD DEPEDSKPEE EDVFKRNGAL LGNYVNHVNS DRRESLQQTN 

       250        260        270        280        290        300 
TTHRPLHVQR PSIPPASDTE KPLFPPAGNS VCHNHHNHNS IGKQVPTSTN ANLNNANMSK 

       310        320        330        340        350        360 
AAHGKRPSIG DLEHVSENGH YSYKHDRELQ RRSSIKRTRY YETYIRSESG DEQLPTICRE 

       370        380        390        400        410        420 
DPEIHGYFRD PRCFGEQEYF SSEECCEDDS SPTWSRQNYS YYNRYPGSSM DFERPRGYHH 

       430        440        450        460        470        480 
PQGFLEDDDS PIGYDSRRSP RRRLLPPTPP SHRRSSFNFE CLRRQNSQDD VLPSPALPHR 

       490        500        510        520        530        540 
AALPLHLMQQ QIMAVAGLDS SKAQKYSPSH STRSWATPPA TPPYRDWTPC YTPLIQVDRS 

       550        560        570        580        590        600 
ESMDQVNGSL PSLHRSSWYT DEPDISYRTF TPASLTVPSS FRNKNSDKQR SADSLVEAVL 

       610        620        630        640        650        660 
ISEGLGRYAR DPKFASATKH EIADACDLTI DEMESAASTL LNGSVCPRAN GDMGPISHRQ 

       670        680        690 
DYELQDFGPG YSDEEPDPGR EEEDLADEMI CITTL

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References

[1]"Neuronal Ca(V)1.3alpha(1) L-type channels activate at relatively hyperpolarized membrane potentials and are incompletely inhibited by dihydropyridines."
Xu W., Lipscombe D.
J. Neurosci. 21:5944-5951(2001) [PubMed: 11487617] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAK72960.1.
Tissue: Superior cervical ganglia EMBL AAK72960.1.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF370010 mRNA. Translation: AAK72960.1.
IPIIPI00231117.
UniGeneRn.89671

3D structure databases

SMRQ91WX8. Positions 136-164.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ91WX8.

Genome annotation databases

EnsemblENSRNOT00000017975; ENSRNOP00000017975; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000019520; ENSRNOP00000019520; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000040759; ENSRNOP00000041766; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000043180; ENSRNOP00000039306; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000045459; ENSRNOP00000049809; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000048459; ENSRNOP00000043046; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000049531; ENSRNOP00000045203; ENSRNOG00000013147; Rattus norvegicus. [Genome view]
ENSRNOT00000051371; ENSRNOP00000051407; ENSRNOG00000013147; Rattus norvegicus. [Genome view]

Phylogenomic databases

HOVERGENQ91WX8.
InParanoidQ91WX8.

Gene expression databases

ArrayExpressQ91WX8.
GenevestigatorQ91WX8.

Family and domain databases

InterProIPR005452. LVDCC_a1dsu.
IPR014873. VDCC_a1su_IQ.
[Graphical view]
PANTHERPTHR10037:SF48. LVDCCAlpha1D. 1 hit.
PfamPF08763. Ca_chan_IQ. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ91WX8_RAT
AccessionPrimary (citable) accession number: Q91WX8
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 19, 2010
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information