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Protein
Submitted name:

MCG141290

Gene

Pcdhb17

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Potential calcium-dependent cell-adhesion protein.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cell adhesionSAAS annotation

Keywords - Ligandi

CalciumSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MCG141290Imported
Submitted name:
Protein Pcdhb17Imported
Submitted name:
Protocadherin beta 17Imported
Gene namesi
Name:Pcdhb17Imported
ORF Names:mCG_141290Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 18

Organism-specific databases

MGIiMGI:2136754. Pcdhb17.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei687 – 710HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_500878522929 – 799Sequence analysisAdd BLAST771

Expressioni

Gene expression databases

BgeeiENSMUSG00000046387.

Interactioni

Protein-protein interaction databases

DIPiDIP-59561N.
STRINGi10090.ENSMUSP00000055072.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 133CadherinInterPro annotationAdd BLAST100
Domaini134 – 242CadherinInterPro annotationAdd BLAST109
Domaini243 – 347CadherinInterPro annotationAdd BLAST105
Domaini348 – 451CadherinInterPro annotationAdd BLAST104
Domaini452 – 561CadherinInterPro annotationAdd BLAST110
Domaini576 – 676CadherinInterPro annotationAdd BLAST101

Keywords - Domaini

RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3594. Eukaryota.
ENOG410XQHI. LUCA.
GeneTreeiENSGT00850000132246.
HOVERGENiHBG054878.
KOiK16494.
OMAiHNITVQI.
OrthoDBiEOG091G024L.
TreeFamiTF332299.

Family and domain databases

Gene3Di2.60.40.60. 5 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR032455. Cadherin_C.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
IPR010221. VCBS_rpt.
[Graphical view]
PfamiPF00028. Cadherin. 5 hits.
PF08266. Cadherin_2. 1 hit.
PF16492. Cadherin_C_2. 1 hit.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 5 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 5 hits.
TIGRFAMsiTIGR01965. VCBS_repeat. 1 hit.
PROSITEiPS00232. CADHERIN_1. 4 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q91VD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METAWMCNLR QRQVLAFFVL LHVSGAGAEL GPYSIEEETE RGSFVANLGK
60 70 80 90 100
DLGVDLAEIS NRRARIISQE NKEHLQLNLQ SGDLLINEKL DREELCGPIE
110 120 130 140 150
PCVLHFQVLM ENPLEVFQAE LRVMDINDYS PVFSEREMIL RILENSALGD
160 170 180 190 200
TFPLNNALDS DVAINNIQTY RLSSNSHFLV VTRNRSDGRK YPELVLEKEL
210 220 230 240 250
DREEEPELRL TLTALDGGAP PRSGTAQVLI EVVDINDNAP KFQQPTYRVQ
260 270 280 290 300
IPENSPTGSL VLTVSANDLD SGDYGKVLYA LSQPSEDISK TLEVNPVTGE
310 320 330 340 350
IRLRKEVDFE TIPSYEVDIK ATDGGGLSGK CTLLLKVVDV NDNAPEVMLS
360 370 380 390 400
ALTSPVPENS PDEVVAVFSV KDPDSANNGK MIASIEEDLP FLLKSSGKNF
410 420 430 440 450
YTLVTKRALD REEREKYNIT ITVSDLGTPR LTTQHTITVQ VSDTNDNAPA
460 470 480 490 500
FNQTSYTLFV RENNSPAMHI GTISATDSDA GSNSHISYSL LPSHDPQLAL
510 520 530 540 550
DSLISINADN GQLFALRALD YEALQAFEFH VGAIDQGSPA LSSQALVRVV
560 570 580 590 600
VLDDNDNAPF VLYPMQNSSA PCTELLPRAA EPGYLVTKVV AVDRDSGQNA
610 620 630 640 650
WLSFQLLKAT EPGLFSVWAH NGEVRTTRLL SERDVPKHRL VLLVKDNGDP
660 670 680 690 700
PRSASVTLHV LVVDGFSQPY LPLPEVARNP AHDEDALTLY LVIALASVSS
710 720 730 740 750
LFLLSVLLFV GVRLCRRARS ASLSGYSVPE GHIPGHLVDV RGVGTLSQSY
760 770 780 790
QYDVCLMGDS SGTSEFNFLK PVFPSSLDQC SGKEIEENSS LHNSFGFHH
Length:799
Mass (Da):87,744
Last modified:December 1, 2001 - v1
Checksum:i13807F0927972952
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC020967 Genomic DNA. No translation available.
BC017149 mRNA. Translation: AAH17149.1.
AY013778 mRNA. Translation: AAK26067.1.
AK077255 mRNA. Translation: BAC36711.1.
CH466528 Genomic DNA. Translation: EDL10154.1.
RefSeqiNP_444372.2. NM_053142.3.
UniGeneiMm.87553.

Genome annotation databases

EnsembliENSMUST00000053856; ENSMUSP00000055072; ENSMUSG00000046387.
GeneIDi93888.
KEGGimmu:93888.
UCSCiuc008eqc.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC020967 Genomic DNA. No translation available.
BC017149 mRNA. Translation: AAH17149.1.
AY013778 mRNA. Translation: AAK26067.1.
AK077255 mRNA. Translation: BAC36711.1.
CH466528 Genomic DNA. Translation: EDL10154.1.
RefSeqiNP_444372.2. NM_053142.3.
UniGeneiMm.87553.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-59561N.
STRINGi10090.ENSMUSP00000055072.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000053856; ENSMUSP00000055072; ENSMUSG00000046387.
GeneIDi93888.
KEGGimmu:93888.
UCSCiuc008eqc.1. mouse.

Organism-specific databases

CTDi93888.
MGIiMGI:2136754. Pcdhb17.

Phylogenomic databases

eggNOGiKOG3594. Eukaryota.
ENOG410XQHI. LUCA.
GeneTreeiENSGT00850000132246.
HOVERGENiHBG054878.
KOiK16494.
OMAiHNITVQI.
OrthoDBiEOG091G024L.
TreeFamiTF332299.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000046387.

Family and domain databases

Gene3Di2.60.40.60. 5 hits.
InterProiIPR002126. Cadherin.
IPR015919. Cadherin-like.
IPR032455. Cadherin_C.
IPR020894. Cadherin_CS.
IPR013164. Cadherin_N.
IPR010221. VCBS_rpt.
[Graphical view]
PfamiPF00028. Cadherin. 5 hits.
PF08266. Cadherin_2. 1 hit.
PF16492. Cadherin_C_2. 1 hit.
[Graphical view]
PRINTSiPR00205. CADHERIN.
SMARTiSM00112. CA. 5 hits.
[Graphical view]
SUPFAMiSSF49313. SSF49313. 5 hits.
TIGRFAMsiTIGR01965. VCBS_repeat. 1 hit.
PROSITEiPS00232. CADHERIN_1. 4 hits.
PS50268. CADHERIN_2. 6 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ91VD8_MOUSE
AccessioniPrimary (citable) accession number: Q91VD8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: November 30, 2016
This is version 126 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.