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Protein

Major capsid protein

Gene

MCP

Organism
Rana tigrina ranavirus
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass (By similarity).By similarity

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Major capsid protein
Short name:
MCP
Alternative name(s):
P50
Gene namesi
Name:MCP
OrganismiRana tigrina ranavirus
Taxonomic identifieri160691 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeAlphairidovirinaeRanavirus
Virus hostiHoplobatrachus tigerinus (Indian bull frog) (Rana tigerina) [TaxID: 103373]

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002223851 – 463Major capsid proteinAdd BLAST463

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homotrimer.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ91QZ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NCLDV major capsid protein family.Curated

Family and domain databases

Gene3Di2.70.9.10. 1 hit.
InterProiView protein in InterPro
IPR031654. Capsid_N.
IPR016111. Hexon_subdom4.
IPR007542. Virus_major_coat_C.
IPR016112. VP_dsDNA_II.
PfamiView protein in Pfam
PF16903. Capsid_N. 1 hit.
PF04451. Capsid_NCLDV. 1 hit.
SUPFAMiSSF49749. SSF49749. 2 hits.

Sequencei

Sequence statusi: Complete.

Q91QZ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSVTGSGIT SGFIDLATYD NLERAMYGGS DATTYFVKEH YPVGWFTKLP
60 70 80 90 100
SLAAKMSGNP AFGQQFSVGV PRSGDYILNA WLVLKTPEVE LLAANQLGEN
110 120 130 140 150
GTIRWTKNPM HNIVESVTLS FNDISAQSFN TAYLDAWSEY TMPEAKRIGY
160 170 180 190 200
YNMIGNTSDL INPAPATGQD GARVLPAKNL VLPLPFFFSR DSGLALPVVS
210 220 230 240 250
LPYNEIRITV KLRAIQDLLI LQHNTTGAIS PIVASDLAGG LPDTVEANVY
260 270 280 290 300
MTVALITGDE RQAMSSTVRD MVVEQVQVAP VHMVNPRNAA TFHTDMRFSH
310 320 330 340 350
AVKALMFMVQ NVTHPSVGSN YTCVTPVVGA GNTVLEPALA VDPVKSASLV
360 370 380 390 400
YENTTRLPDM GVEYYSLVEP WYYATSIPVS TGHHLYSYAL SMQDPHPSGS
410 420 430 440 450
TNYGRLTNAS LNVTLSAEAT TAAAGGGGDN SGYTTAQKYA LIVLAINHNI
460
IRIMNGSMGF PIL
Length:463
Mass (Da):49,923
Last modified:December 1, 2001 - v1
Checksum:i6306DDC4E6123FFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY033630 Genomic DNA. Translation: AAK55105.1.

Similar proteinsi

Entry informationi

Entry nameiMCP_RTRV
AccessioniPrimary (citable) accession number: Q91QZ8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: December 1, 2001
Last modified: September 27, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families