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Q91FI1

- 343L_IIV6

UniProt

Q91FI1 - 343L_IIV6

Protein

Probable DNA-directed RNA polymerase subunit 343L

Gene

IIV6-343L

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    Component of the DNA-dependent RNA polymerase that catalyzes the transcription in the cytoplasm of viral DNA into RNA using the four ribonucleoside triphosphates as substrates.By similarity

    Catalytic activityi

    Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed RNA polymerase activity Source: UniProtKB-KW

    GO - Biological processi

    1. transcription, DNA-templated Source: InterPro

    Keywords - Molecular functioni

    Nucleotidyltransferase, Transferase

    Keywords - Biological processi

    Transcription

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable DNA-directed RNA polymerase subunit 343L (EC:2.7.7.6)
    Gene namesi
    ORF Names:IIV6-343L
    OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
    Taxonomic identifieri176652 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
    Chilo suppressalis (striped riceborer) [TaxID: 168631]
    Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
    Gryllus campestris [TaxID: 58607]
    Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
    ProteomesiUP000001359: Genome

    Subcellular locationi

    Keywords - Cellular componenti

    DNA-directed RNA polymerase

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 462462Probable DNA-directed RNA polymerase subunit 343LPRO_0000377496Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ91FI1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi41 – 444Poly-Lys

    Sequence similaritiesi

    Belongs to the RNA polymerase beta' chain family.Curated

    Family and domain databases

    InterProiIPR007081. RNA_pol_Rpb1_5.
    [Graphical view]
    PfamiPF04998. RNA_pol_Rpb1_5. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q91FI1-1 [UniParc]FASTAAdd to Basket

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    MELKNMELKR KLTINEINFI VDFIQPRPYI PPDIENAIIF KKKKGIIDQL    50
    VTIEIYESLI PKLKEEIEKQ YVNSLIDPGE CVGIIGAQSM GEYSTQATLN 100
    TFHVAGVDTG SSTGVSRFQD LINASKTVKI DNISLFFKPL FVKKNITELR 150
    KLVASKLIEV KLSHLMITSV IVKTEEISQY RQEIESCIEL YNDEHFNYED 200
    YEFCLKITLS RELLLKHRLH PSVIKNKLEE YNNDCKYAFL PISSQQILFF 250
    IFIYVNTDEC IEKIIQDLMD KKICGVDGII RYDFKRKDLF DDEWYIETTG 300
    GSFSNINCLA DIFDLTKTKT TSIWDLYNTF GIEATKQFLI QELKTVMDGV 350
    DICHIKLLVE RMTYSGTIEP ITRYTMRNDE SPLSRASFEE SFETFLKAAK 400
    FKEIEPFTGV SASVIGGKKT EVGTYMCDIL IDMEKLNLGD LKTIEDDDEY 450
    DYEDDGDLVY VE 462
    Length:462
    Mass (Da):53,326
    Last modified:December 1, 2001 - v1
    Checksum:iABC0DFF40946804B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82204.1.
    RefSeqiNP_149806.1. NC_003038.1.

    Genome annotation databases

    GeneIDi1733090.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82204.1 .
    RefSeqi NP_149806.1. NC_003038.1.

    3D structure databases

    ProteinModelPortali Q91FI1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1733090.

    Family and domain databases

    InterProi IPR007081. RNA_pol_Rpb1_5.
    [Graphical view ]
    Pfami PF04998. RNA_pol_Rpb1_5. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
      Jakob N.J., Mueller K., Bahr U., Darai G.
      Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
      Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
      Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.

    Entry informationi

    Entry namei343L_IIV6
    AccessioniPrimary (citable) accession number: Q91FI1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 16, 2009
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3