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Q91FI1 (343L_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable DNA-directed RNA polymerase subunit 343L

EC=2.7.7.6
Gene names
ORF Names:IIV6-343L
OrganismInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus) [Reference proteome]
Taxonomic identifier176652 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Component of the DNA-dependent RNA polymerase that catalyzes the transcription in the cytoplasm of viral DNA into RNA using the four ribonucleoside triphosphates as substrates By similarity.

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

Sequence similarities

Belongs to the RNA polymerase beta' chain family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   Molecular functionNucleotidyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 462462Probable DNA-directed RNA polymerase subunit 343L
PRO_0000377496

Regions

Compositional bias41 – 444Poly-Lys

Sequences

Sequence LengthMass (Da)Tools
Q91FI1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: ABC0DFF40946804B

FASTA46253,326
        10         20         30         40         50         60 
MELKNMELKR KLTINEINFI VDFIQPRPYI PPDIENAIIF KKKKGIIDQL VTIEIYESLI 

        70         80         90        100        110        120 
PKLKEEIEKQ YVNSLIDPGE CVGIIGAQSM GEYSTQATLN TFHVAGVDTG SSTGVSRFQD 

       130        140        150        160        170        180 
LINASKTVKI DNISLFFKPL FVKKNITELR KLVASKLIEV KLSHLMITSV IVKTEEISQY 

       190        200        210        220        230        240 
RQEIESCIEL YNDEHFNYED YEFCLKITLS RELLLKHRLH PSVIKNKLEE YNNDCKYAFL 

       250        260        270        280        290        300 
PISSQQILFF IFIYVNTDEC IEKIIQDLMD KKICGVDGII RYDFKRKDLF DDEWYIETTG 

       310        320        330        340        350        360 
GSFSNINCLA DIFDLTKTKT TSIWDLYNTF GIEATKQFLI QELKTVMDGV DICHIKLLVE 

       370        380        390        400        410        420 
RMTYSGTIEP ITRYTMRNDE SPLSRASFEE SFETFLKAAK FKEIEPFTGV SASVIGGKKT 

       430        440        450        460 
EVGTYMCDIL IDMEKLNLGD LKTIEDDDEY DYEDDGDLVY VE 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAK82204.1.
RefSeqNP_149806.1. NC_003038.1.

3D structure databases

ProteinModelPortalQ91FI1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733090.

Family and domain databases

InterProIPR007081. RNA_pol_Rpb1_5.
[Graphical view]
PfamPF04998. RNA_pol_Rpb1_5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry name343L_IIV6
AccessionPrimary (citable) accession number: Q91FI1
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families