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Q91FH5 (VF349_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative transcription elongation factor S-II-like protein 349L
Gene names
ORF Names:IIV6-349L
OrganismInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus) [Reference proteome]
Taxonomic identifier176652 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the IIV-6 349L family.

Contains 1 TFIIS-type zinc finger.

Ontologies

Keywords
   DomainZinc-finger
   LigandMetal-binding
Zinc
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 140140Putative transcription elongation factor S-II-like protein 349L
PRO_0000377767

Regions

Zinc finger100 – 13940TFIIS-type

Sequences

Sequence LengthMass (Da)Tools
Q91FH5 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: C856667EFD2F9CAE

FASTA14016,146
        10         20         30         40         50         60 
MDLALKVKIL KMLCKYLTNK NNISLFFNIL TNIPNGDDYM FECVQHFIQM KNSNECDIND 

        70         80         90        100        110        120 
LFLKLKSQLL VWQDSSFEQF LKIEKEEDNF LESPLEVAEG AIKCKCGSER VFSFSKQTRS 

       130        140 
GDESTSVFAL CSSCKSKWVL 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAK82210.1.
RefSeqNP_149812.1. NC_003038.1.

3D structure databases

ProteinModelPortalQ91FH5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733013.

Phylogenomic databases

ProtClustDBCLSP2511686.

Family and domain databases

InterProIPR001222. Znf_TFIIS.
[Graphical view]
PfamPF01096. TFIIS_C. 1 hit.
[Graphical view]
SMARTSM00440. ZnF_C2C2. 1 hit.
[Graphical view]
PROSITEPS51133. ZF_TFIIS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVF349_IIV6
AccessionPrimary (citable) accession number: Q91FH5
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families