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Q91FF5

- VF369_IIV6

UniProt

Q91FF5 - VF369_IIV6

Protein

Probable RAD2-like endonuclease 369L

Gene

IIV6-369L

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    Probable endonuclease.Curated

    Cofactori

    Binds 2 magnesium ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi34 – 341Magnesium 1By similarity
    Metal bindingi86 – 861Magnesium 1By similarity
    Metal bindingi198 – 1981Magnesium 1By similarity
    Metal bindingi200 – 2001Magnesium 1By similarity
    Metal bindingi219 – 2191Magnesium 2By similarity
    Metal bindingi221 – 2211Magnesium 2By similarity
    Metal bindingi277 – 2771Magnesium 2By similarity

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. endonuclease activity Source: UniProtKB-KW
    3. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. DNA repair Source: InterPro

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Ligandi

    Magnesium, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable RAD2-like endonuclease 369L (EC:3.1.-.-)
    Gene namesi
    ORF Names:IIV6-369L
    OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
    Taxonomic identifieri176652 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
    Chilo suppressalis (striped riceborer) [TaxID: 168631]
    Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
    Gryllus campestris [TaxID: 58607]
    Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
    ProteomesiUP000001359: Genome

    Subcellular locationi

    Host nucleus By similarity

    GO - Cellular componenti

    1. host cell nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 415415Probable RAD2-like endonuclease 369LPRO_0000377501Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ91FF5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni1 – 114114N-domainBy similarityAdd
    BLAST
    Regioni163 – 297135I-domainBy similarityAdd
    BLAST

    Sequence similaritiesi

    Belongs to the XPG/RAD2 endonuclease family.Curated

    Family and domain databases

    Gene3Di3.40.50.1010. 2 hits.
    InterProiIPR020045. 5-3_exonuclease_C.
    IPR029060. PIN_domain-like.
    IPR006086. XPG-I_dom.
    IPR006085. XPG_DNA_repair_N.
    [Graphical view]
    PfamiPF00867. XPG_I. 1 hit.
    PF00752. XPG_N. 1 hit.
    [Graphical view]
    SMARTiSM00484. XPGI. 1 hit.
    SM00485. XPGN. 1 hit.
    [Graphical view]
    SUPFAMiSSF47807. SSF47807. 1 hit.
    SSF88723. SSF88723. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q91FF5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGIKNLTKFI KEKCQEAYVT ENINELSFKK IAIDTPMYMY KYKSMNAAKM    50
    VENNGIYYNP DGWLWSFIYF IYSLRKHDIH PIFILEGGYP EEKNKTRMAR 100
    KKDREDVKKK TLSLEESISS YATSLRLRPE DIPQDLKEEW NKIAKKNNLP 150
    FEDFDFETVK DHVKQRHRYD IRITNRDYEK LKILLKIMNT PFIQAPMEAE 200
    AFCAYLYKKK IIHGIASNDS DILAYGCNLI VDFEFDVKID EETKISKITY 250
    INYDYLLNKL DLQSSEFLDF CIMCGTDYND NIYRIGAVKS YELIKVQKCI 300
    ENVGKFLDPN NKKGTILILN HLRIRHIFNH YGMKNIDDVT NMQFLEKKAS 350
    WSSVPNFYLL TMLTIKFNIN IDLEWIRHGF EKCNIKWDCE SEYEENVEKT 400
    NVEETNNEVD EFPIF 415
    Length:415
    Mass (Da):49,317
    Last modified:December 1, 2001 - v1
    Checksum:iCE6E457A686F11F3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82229.1.
    RefSeqiNP_149832.1. NC_003038.1.

    Genome annotation databases

    GeneIDi1733029.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAK82229.1 .
    RefSeqi NP_149832.1. NC_003038.1.

    3D structure databases

    ProteinModelPortali Q91FF5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1733029.

    Family and domain databases

    Gene3Di 3.40.50.1010. 2 hits.
    InterProi IPR020045. 5-3_exonuclease_C.
    IPR029060. PIN_domain-like.
    IPR006086. XPG-I_dom.
    IPR006085. XPG_DNA_repair_N.
    [Graphical view ]
    Pfami PF00867. XPG_I. 1 hit.
    PF00752. XPG_N. 1 hit.
    [Graphical view ]
    SMARTi SM00484. XPGI. 1 hit.
    SM00485. XPGN. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47807. SSF47807. 1 hit.
    SSF88723. SSF88723. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
      Jakob N.J., Mueller K., Bahr U., Darai G.
      Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
      Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
      Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.

    Entry informationi

    Entry nameiVF369_IIV6
    AccessioniPrimary (citable) accession number: Q91FF5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 16, 2009
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3