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Q91F72 (454R_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative DNA-directed RNA polymerase subunit 454R
Gene names
ORF Names:IIV6-454R
OrganismInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus) [Reference proteome]
Taxonomic identifier176652 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]

Protein attributes

Sequence length184 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Component of the DNA-dependent RNA polymerase that catalyzes the transcription in the cytoplasm of viral DNA into RNA using the four ribonucleoside triphosphates as substrates By similarity.

Sequence similarities

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   Molecular functionNucleotidyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 184184Putative DNA-directed RNA polymerase subunit 454R
PRO_0000377510

Sequences

Sequence LengthMass (Da)Tools
Q91F72 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 35708A756C39FE74

FASTA18421,366
        10         20         30         40         50         60 
MFSKSYQITK EMYEARGWQI IKEDELTILA KVNSRENTNP EFAIAKFIKT TQEIKSPPLS 

        70         80         90        100        110        120 
QIIDFSSNEY VCVTIICDGS ITTNVKKIEQ TTKGKVEIFH NKDLQMNITK YHLQPLFNKL 

       130        140        150        160        170        180 
LDEEAKDFKK KYIKCKIENG KKIILQSFPS MSKSDPIARF FKYQSGDVIK ITNKDGFVSY 


RIVK 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAK82314.1.
RefSeqNP_149917.1. NC_003038.1.

3D structure databases

ProteinModelPortalQ91F72.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1732998.

Phylogenomic databases

ProtClustDBCLSP2743523.

Family and domain databases

Gene3D3.90.940.20. 1 hit.
InterProIPR014381. DNA_RNA_pol_RPB5_euk/virus.
IPR000783. RNA_pol_subH/Rpb5_C.
[Graphical view]
PfamPF01191. RNA_pol_Rpb5_C. 1 hit.
[Graphical view]
PIRSFPIRSF000747. RPB5. 1 hit.
SUPFAMSSF55287. SSF55287. 1 hit.
ProtoNetSearch...

Entry information

Entry name454R_IIV6
AccessionPrimary (citable) accession number: Q91F72
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families