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Protein

Putative DNA-directed RNA polymerase subunit 454R

Gene

IIV6-454R

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Component of the DNA-dependent RNA polymerase that catalyzes the transcription in the cytoplasm of viral DNA into RNA using the four ribonucleoside triphosphates as substrates.By similarity

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed RNA polymerase activity Source: UniProtKB-KW

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, Transferase

Keywords - Biological processi

Transcription

Names & Taxonomyi

Protein namesi
Recommended name:
Putative DNA-directed RNA polymerase subunit 454R
Gene namesi
ORF Names:IIV6-454R
OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Taxonomic identifieri176652 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
ProteomesiUP000001359 Componenti: Genome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 184184Putative DNA-directed RNA polymerase subunit 454RPRO_0000377510Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ91F72.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK03013.

Family and domain databases

Gene3Di3.90.940.20. 1 hit.
InterProiIPR014381. DNA_RNA_pol_RPB5_euk/virus.
IPR000783. RNA_pol_subH/Rpb5_C.
[Graphical view]
PfamiPF01191. RNA_pol_Rpb5_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000747. RPB5. 1 hit.
SUPFAMiSSF55287. SSF55287. 1 hit.

Sequencei

Sequence statusi: Complete.

Q91F72-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSKSYQITK EMYEARGWQI IKEDELTILA KVNSRENTNP EFAIAKFIKT
60 70 80 90 100
TQEIKSPPLS QIIDFSSNEY VCVTIICDGS ITTNVKKIEQ TTKGKVEIFH
110 120 130 140 150
NKDLQMNITK YHLQPLFNKL LDEEAKDFKK KYIKCKIENG KKIILQSFPS
160 170 180
MSKSDPIARF FKYQSGDVIK ITNKDGFVSY RIVK
Length:184
Mass (Da):21,366
Last modified:November 30, 2001 - v1
Checksum:i35708A756C39FE74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF303741 Genomic DNA. Translation: AAK82314.1.
RefSeqiNP_149917.1. NC_003038.1.

Genome annotation databases

GeneIDi1732998.
KEGGivg:1732998.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF303741 Genomic DNA. Translation: AAK82314.1.
RefSeqiNP_149917.1. NC_003038.1.

3D structure databases

ProteinModelPortaliQ91F72.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1732998.
KEGGivg:1732998.

Phylogenomic databases

KOiK03013.

Family and domain databases

Gene3Di3.90.940.20. 1 hit.
InterProiIPR014381. DNA_RNA_pol_RPB5_euk/virus.
IPR000783. RNA_pol_subH/Rpb5_C.
[Graphical view]
PfamiPF01191. RNA_pol_Rpb5_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000747. RPB5. 1 hit.
SUPFAMiSSF55287. SSF55287. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
    Jakob N.J., Mueller K., Bahr U., Darai G.
    Virology 286:182-196(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
    Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
    Virol. J. 4:11-11(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.

Entry informationi

Entry namei454R_IIV6
AccessioniPrimary (citable) accession number: Q91F72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 15, 2009
Last sequence update: November 30, 2001
Last modified: March 31, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.