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Protein
Submitted name:

N-methyl-D-aspartate receptor type1

Gene
N/A
Organism
Anas platyrhynchos (Mallard) (Anas boschas)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Ligand-gated ion channelSAAS annotation, ReceptorSAAS annotationImported

Keywords - Biological processi

Ion transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
N-methyl-D-aspartate receptor type1Imported
OrganismiAnas platyrhynchos (Mallard) (Anas boschas)Imported
Taxonomic identifieri8839 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeAnseriformesAnatidaeAnas

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei560 – 57819HelicalSequence analysisAdd
BLAST
Transmembranei633 – 65523HelicalSequence analysisAdd
BLAST
Transmembranei811 – 83525HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell junction, Cell membraneSAAS annotation, Membrane, Postsynaptic cell membraneSAAS annotation, Synapse

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 965947Sequence analysisPRO_5004318691Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ91979.
SMRiQ91979. Positions 396-798.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini433 – 793361PBPeInterPro annotationAdd
BLAST
Domaini439 – 50567Lig_chan-Glu_bdInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. [View classification]SAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG052638.
KOiK05208.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR018882. CaM-bd_C0_NMDA_rcpt_NR1.
IPR019594. Glu/Gly-bd.
IPR001508. Iono_rcpt_met.
IPR001320. Iontro_rcpt.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF01094. ANF_receptor. 1 hit.
PF10562. CaM_bdg_C0. 1 hit.
PF00060. Lig_chan. 1 hit.
PF10613. Lig_chan-Glu_bd. 1 hit.
[Graphical view]
PRINTSiPR00177. NMDARECEPTOR.
SMARTiSM00918. Lig_chan-Glu_bd. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

Q91979-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTMRLLLLA LLFSSSFARA GCDPKIVNIG AVLSTKKHEQ IFREAVNQAN
60 70 80 90 100
KRHGTWKLQL NATSVTHKPN AIQMALSVCE DLISSQVYAI LVSHPPAPND
110 120 130 140 150
HLTPTPVSYT AGFYRIPVIG LTTRMSIYSD KSIHLSFLRT VPPYSHQANV
160 170 180 190 200
WFEMMRVFNW NHVILIVSDD HEGRAAQKKL ETLLEERESK AEKVLQFDPG
210 220 230 240 250
TKNVTSLLLE AKELEARVII LSASEDDAAT VYRSAAMLNM TGSGYVWLVG
260 270 280 290 300
EREISGNALR YAPDGVIGLQ LINGKNESAH ISDAVAVVAQ AVHDLFEKEN
310 320 330 340 350
ITDPPRGCVG NTNIWKTGPL FKRVLMSSKY SEGVTGRVEF NEDGDRKFAN
360 370 380 390 400
YSIMNLQNRK LVQVGIYNGS HVLTNDRKII WPGGETEKPQ GYQMSTKLKI
410 420 430 440 450
VTIHQEPFVY VKPTQADGTC REEFTINGDP VKKVFCTGPN ETIPGRPTVA
460 470 480 490 500
LCCYGFCIDL LIRLAGVMNF TYEVHLVADG KFGTQERVNN SNKKEWNGMM
510 520 530 540 550
GELLSGQADM IVAPLTINNE RAQYIEFSKP FKYQGLTILV KKEIPRSTLD
560 570 580 590 600
SFMQPFQSTL WLLVGLSVHV VAVMLYLLDR FSPFGRFKVN SEEEEEDALT
610 620 630 640 650
LSSAMWFSWG VLLNSGIGEG APRSFSARIL GMVWAGFAMI IVASYTANLA
660 670 680 690 700
AFLVLDRPEE RITGINDPRL RNPSDKFIYA TVKQSSVDIY FRRQVELSTM
710 720 730 740 750
YRHMEKHNYE SAAEAIQAVR DNKLHAFIWD SAVLEFEASQ KCDLVTTGEL
760 770 780 790 800
FFRSGFGIGM RKDSPWKQNV SLAILKSHEN GFMEDLDKTW VRYQECDSRS
810 820 830 840 850
NAPATLTFEN MAGVFMLVAG GIVAGIFLIF IEIAYKRHKD ARRKQMQLAF
860 870 880 890 900
AAVNVWRKNL QDRKSGRAEP DPKKKATFRS ITSTLASSFK RRRSSKDTPC
910 920 930 940 950
RMVPQECQRD RLAPWSQDSP GKLPPHSERP SAHHHPSCTA SPRHIIPTAP
960
GGDACVPHRQ LLQLE
Length:965
Mass (Da):108,243
Last modified:November 1, 1996 - v1
Checksum:iF9E0B265D4B440FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83352 mRNA. Translation: BAA11898.1.
PIRiI51244.
RefSeqiNP_001297289.1. NM_001310360.1.

Genome annotation databases

GeneIDi101789524.
KEGGiapla:101789524.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83352 mRNA. Translation: BAA11898.1.
PIRiI51244.
RefSeqiNP_001297289.1. NM_001310360.1.

3D structure databases

ProteinModelPortaliQ91979.
SMRiQ91979. Positions 396-798.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101789524.
KEGGiapla:101789524.

Organism-specific databases

CTDi2902.

Phylogenomic databases

HOVERGENiHBG052638.
KOiK05208.

Family and domain databases

InterProiIPR001828. ANF_lig-bd_rcpt.
IPR018882. CaM-bd_C0_NMDA_rcpt_NR1.
IPR019594. Glu/Gly-bd.
IPR001508. Iono_rcpt_met.
IPR001320. Iontro_rcpt.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF01094. ANF_receptor. 1 hit.
PF10562. CaM_bdg_C0. 1 hit.
PF00060. Lig_chan. 1 hit.
PF10613. Lig_chan-Glu_bd. 1 hit.
[Graphical view]
PRINTSiPR00177. NMDARECEPTOR.
SMARTiSM00918. Lig_chan-Glu_bd. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ91979_ANAPL
AccessioniPrimary (citable) accession number: Q91979
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.