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Protein
Submitted name:

Coup transcription factor

Gene

nr2f5

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi60 – 135Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Coup transcription factorImported
Gene namesi
Name:nr2f5Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-865600. nr2f5.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ91720.

Structurei

3D structure databases

ProteinModelPortaliQ91720.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 135Nuclear receptor DNA-bindingInterPro annotationAdd BLAST76

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG005606.
KOiK08702.

Family and domain databases

Gene3Di3.30.50.10. 1 hit.
InterProiView protein in InterPro
IPR003068. COUP_TF.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001723. Nuclear_hrmn_rcpt.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
PfamiView protein in Pfam
PF00104. Hormone_recep. 1 hit.
PF00105. zf-C4. 1 hit.
PRINTSiPR01282. COUPTNFACTOR.
PR00398. STRDHORMONER.
PR00047. STROIDFINGER.
SMARTiView protein in SMART
SM00430. HOLI. 1 hit.
SM00399. ZnF_C4. 1 hit.
SUPFAMiSSF48508. SSF48508. 1 hit.
PROSITEiView protein in PROSITE
PS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q91720-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMVVNPWQE DIPGVPGSQM NNPPGLCNQD PGGTPQTPTT PKGGIPGQDP
60 70 80 90 100
VHSGDKGVPN VDCLVCGDKS SGKHYGQFTC EGCKSFFKRS VRRNLTYTCR
110 120 130 140 150
SNRDCPIDQH HRNQCQYCRL KKCLKVGMRR EVQRGRMSHP QTSPGQYTLN
160 170 180 190 200
NVDPYNGHSY LTGFISLLLR AEPYPTSRYG AQCLQPNNIM GIENICELAA
210 220 230 240 250
RLLFSAIEWA KNIPFFPDFQ LSDQVSLLRM TWSELFVLNA AQCSMPLHVA
260 270 280 290 300
PLLARAGLHA SPMSADRVVA FMDHIRIFQE QVEKLKALHV DSAEYSCLKA
310 320 330 340 350
IALFTPDAVG LSDIGHVESI QEKSQCALEE YVRNQYPNQP TRFGRLLLRL
360 370 380 390
PSLRIVSAPV IEQLFFVRLV GKTPIETLIR DMLLSGSSFN WPYMPMQ
Length:397
Mass (Da):44,470
Last modified:November 1, 1996 - v1
Checksum:iD0A53FA5AF66E4A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X63092 mRNA. Translation: CAA44806.1.
PIRiS20617.
RefSeqiNP_001095229.1. NM_001101759.1.
UniGeneiXl.1157.

Genome annotation databases

GeneIDi397883.
KEGGixla:397883.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ91720_XENLA
AccessioniPrimary (citable) accession number: Q91720
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 7, 2017
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)