Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Xbr-1b

Gene

ventx2.1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Xbr-1bImported
Gene namesi
Name:ventx2.1Imported
Synonyms:Xbr-1bImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6252342. ventx2.1.

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ91669.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini181 – 241Homeobox DNA-bindingInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG067091.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q91669-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKAFSSVEW LAQSSRRSYR EKPSKVDQRY SPYPSPSLPS WNSEVSPSSW
60 70 80 90 100
NNQLSRDPDS AQVSPCPGNA QVSPYSSDSE ISLYSHEEET TFHGRDLNTS
110 120 130 140 150
TPGDNGFLHR DTTTYYRGME TLPASTPATS PVKGAQSVDS GYSTSTDSDY
160 170 180 190 200
ESEASRSSSA APEGDATMSL SPSDTSDEEG KMGRRLRTAF TSDQISTLEK
210 220 230 240 250
TFQKHRYLGA SERRKLAAKL QLSEVQIKTW FQNRRMKYKR EIQDGRPDSY
260 270 280 290 300
HPAQFFGVYG YSQQPTPVFQ HAVQQPYPGY NPLMESMPCT MPYAMHPPAM
310 320 330
DSLSPFNSQP FQMLYLPQQH LGQPLFFQEE RPFVRY
Length:336
Mass (Da):37,984
Last modified:November 1, 1996 - v1
Checksum:i0E0AC41792F09893
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43938 mRNA. Translation: AAB03567.1.
RefSeqiNP_001081450.1. NM_001087981.1.
UniGeneiXl.366.

Genome annotation databases

GeneIDi397844.
KEGGixla:397844.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43938 mRNA. Translation: AAB03567.1.
RefSeqiNP_001081450.1. NM_001087981.1.
UniGeneiXl.366.

3D structure databases

ProteinModelPortaliQ91669.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi397844.
KEGGixla:397844.

Organism-specific databases

CTDi397844.
XenbaseiXB-GENE-6252342. ventx2.1.

Phylogenomic databases

HOVERGENiHBG067091.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ91669_XENLA
AccessioniPrimary (citable) accession number: Q91669
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.