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Protein
Submitted name:

Gene 16 protein

Gene

paaf1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Gene 16 proteinImported
Gene namesi
Name:paaf1Imported
Synonyms:gene 16Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-5904792. paaf1.

Structurei

3D structure databases

ProteinModelPortaliQ91652.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini65 – 190126WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Phylogenomic databases

HOVERGENiHBG056033.
KOiK11887.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q91652-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSIQGDWDQ VLREAEGEVW VSCKIPGKPT IRGSLTSKGI SSDGVLEVTT
60 70 80 90 100
SEEFVVQESP YASFSNVHEK NVSYLDISSG GDLGVSSSTD QTFKVWETHN
110 120 130 140 150
AEVKSVLEGH TMDVFCCKFF PSGQEVLSGG LDSLVKVWSV NDGSCLATLK
160 170 180 190 200
GHRGSILDIA VVADGQNVIS SGQDGTARLW DSAQGSCISV VDDSYSPINA
210 220 230 240 250
IAVGEVGNSV NLGSSKEAPS DREVGTEGKL LILAREDKSL EGVSLHSRQS
260 270 280 290 300
VFICEGSDPF NCCTFISSVG VLAGDLNGNI FHVDIRNPKT AVETVSWSER
310 320 330 340 350
PVLSLVPFRD TYIASYGNGT CYIPSKGSDQ VLQLTGPQKQ PVFQVAAWKK
360 370
LVYSCCRDGF IRKYEIPDLY EIPDLG
Length:376
Mass (Da):40,469
Last modified:November 1, 1996 - v1
Checksum:i8251996A0063680A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U41857 mRNA. Translation: AAC59873.1.
RefSeqiNP_001081796.1. NM_001088327.1.
UniGeneiXl.357.

Genome annotation databases

GeneIDi398057.
KEGGixla:398057.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U41857 mRNA. Translation: AAC59873.1.
RefSeqiNP_001081796.1. NM_001088327.1.
UniGeneiXl.357.

3D structure databases

ProteinModelPortaliQ91652.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi398057.
KEGGixla:398057.

Organism-specific databases

CTDi80227.
XenbaseiXB-GENE-5904792. paaf1.

Phylogenomic databases

HOVERGENiHBG056033.
KOiK11887.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ91652_XENLA
AccessioniPrimary (citable) accession number: Q91652
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.