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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

cnbp

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Gene namesi
Name:cnbpImported
Synonyms:CNBPImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-919603. cnbp.

Structurei

3D structure databases

ProteinModelPortaliQ91594.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini45 – 58CCHC-typeInterPro annotationAdd BLAST14
Domaini65 – 80CCHC-typeInterPro annotationAdd BLAST16
Domaini89 – 102CCHC-typeInterPro annotationAdd BLAST14
Domaini109 – 125CCHC-typeInterPro annotationAdd BLAST17
Domaini127 – 143CCHC-typeInterPro annotationAdd BLAST17
Domaini149 – 162CCHC-typeInterPro annotationAdd BLAST14

Phylogenomic databases

HOVERGENiHBG000397.
KOiK09250.

Family and domain databases

Gene3Di4.10.60.10. 7 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.

Sequencei

Sequence statusi: Complete.

Q91594-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RTGHWARECP TGGGRGRGGG RGRGRGGFSS SRDICYRCGE
60 70 80 90 100
SGHLAKDCDL QEDACYNCGR GGHIAKDCKE PRKEREQCCY NCGKPGHLAR
110 120 130 140 150
DCDHADEHRC YSCGEFGHIQ KDCTKVKCYR CGETGHVAIN CSKTSEVNCY
160
RCGESGHLAR ECTIEATA
Length:168
Mass (Da):18,374
Last modified:November 1, 1996 - v1
Checksum:i5E60B1ED26EBDA20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U20977 mRNA. Translation: AAA81168.1.
RefSeqiNP_001084082.1. NM_001090613.1.
UniGeneiXl.79428.
Xl.985.

Genome annotation databases

GeneIDi399294.
KEGGixla:399294.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U20977 mRNA. Translation: AAA81168.1.
RefSeqiNP_001084082.1. NM_001090613.1.
UniGeneiXl.79428.
Xl.985.

3D structure databases

ProteinModelPortaliQ91594.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi399294.
KEGGixla:399294.

Organism-specific databases

CTDi399294.
XenbaseiXB-GENE-919603. cnbp.

Phylogenomic databases

HOVERGENiHBG000397.
KOiK09250.

Family and domain databases

Gene3Di4.10.60.10. 7 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ91594_XENLA
AccessioniPrimary (citable) accession number: Q91594
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 12, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.