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Protein
Submitted name:

Fast myotomal muscle tropomyosin

Gene

tpm1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Fast myotomal muscle tropomyosinImported
Gene namesi
Name:tpm1Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo

Structurei

3D structure databases

SMRiQ91472. Positions 1-284.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1 – 133133Sequence analysisAdd
BLAST
Coiled coili148 – 273126Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the tropomyosin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG107404.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q91472-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAIKKKMQM LKLDKENALD RAEGAEGDKK AAEDKSKQLE DDLVALQKKL
60 70 80 90 100
KGTEDELDKY SESLKDAQEK LEVAEKTATD AEADVASLNR RIQLVEEELD
110 120 130 140 150
RAQERLATAL TKLEEAEKAA DESERGMKVI ENRASKDEEK MELQDIQLKE
160 170 180 190 200
AKHIAEEADR KYEEVARKLV IIESDLERTE ERAELSEGKC SELEEELKTV
210 220 230 240 250
TNNLKSLEAQ AEKYSQKEDK YEEEIKVLTD KLKEAETRAE FAERSVAKLE
260 270 280
KTIDDLEDEL YAQKLKYKAI SEELDNALND MTSI
Length:284
Mass (Da):32,492
Last modified:November 1, 1996 - v1
Checksum:i23D448EEDC98434D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L25609 mRNA. Translation: AAB36559.1.
BT149915 mRNA. Translation: AGH92520.1.
BT149980 mRNA. Translation: AGH92584.1.
PIRiS66520.
RefSeqiNP_001117128.1. NM_001123656.1.
UniGeneiSsa.31447.
Ssa.33970.

Genome annotation databases

GeneIDi100136562.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L25609 mRNA. Translation: AAB36559.1.
BT149915 mRNA. Translation: AGH92520.1.
BT149980 mRNA. Translation: AGH92584.1.
PIRiS66520.
RefSeqiNP_001117128.1. NM_001123656.1.
UniGeneiSsa.31447.
Ssa.33970.

3D structure databases

SMRiQ91472. Positions 1-284.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100136562.

Organism-specific databases

CTDi7168.

Phylogenomic databases

HOVERGENiHBG107404.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ91472_SALSA
AccessioniPrimary (citable) accession number: Q91472
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.