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Protein
Submitted name:

Snail1

Gene

snai1a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • NF-kappaB binding Source: ZFIN
  • nucleic acid binding Source: InterPro

GO - Biological processi

  • cell migration involved in gastrulation Source: ZFIN
  • dorsal/ventral pattern formation Source: ZFIN
  • epithelial to mesenchymal transition Source: ZFIN
  • gastrulation Source: ZFIN
  • mesodermal cell migration Source: ZFIN

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Snail1Imported
Gene namesi
Name:snai1aImported
Synonyms:snail1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-990415-255. snai1a.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiQ91367.

Interactioni

GO - Molecular functioni

  • NF-kappaB binding Source: ZFIN

Structurei

3D structure databases

ProteinModelPortaliQ91367.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 173C2H2-typeInterPro annotationAdd BLAST24
Domaini176 – 203C2H2-typeInterPro annotationAdd BLAST28
Domaini204 – 231C2H2-typeInterPro annotationAdd BLAST28
Domaini232 – 250C2H2-typeInterPro annotationAdd BLAST19

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2462. Eukaryota.
ENOG41106JS. LUCA.
HOGENOMiHOG000261665.
HOVERGENiHBG007477.
PhylomeDBiQ91367.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 4 hits.
SUPFAMiSSF57667. SSF57667. 3 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.

Sequencei

Sequence statusi: Complete.

Q91367-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRSFLVKKY FTSKRPNYSE LECQNDTSPD RYPLAELPAV SNDFPVTCLT
60 70 80 90 100
TGLVWDVSLL PSLHNSPSPS TLSTNQGPLD LSSPSSISCS SSGEEDEGRT
110 120 130 140 150
SDPPSPPSPD SSDTYHPQQT SRPRRSNKSR AGQREDKSEA AVTAASRPAF
160 170 180 190 200
FCKHCPKEYN SLGALKMHIR SHTLPCVCPT CGKAFSRPWL LRGHIRTHTG
210 220 230 240 250
ERPFSCPHCN RAFADRSNLR AHLQTHADVK KYQCSTCSRT FSRMSLLQKH
260
SAAGCCPSTA NVQ
Length:263
Mass (Da):28,984
Last modified:November 1, 1996 - v1
Checksum:i7F43CB6A57C25D70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S68799 mRNA. Translation: AAB29875.1.
PIRiI51225.
UniGeneiDr.141640.
Dr.75079.

Similar proteinsi

Entry informationi

Entry nameiQ91367_DANRE
AccessioniPrimary (citable) accession number: Q91367
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)