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Protein
Submitted name:

Cell adhesion molecule OCAM

Gene

ncam2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • cell adhesion Source: InterPro
  • response to hypoxia Source: ZFIN

Names & Taxonomyi

Protein namesi
Submitted name:
Cell adhesion molecule OCAMImported
Submitted name:
Neural cell adhesion molecule 2Imported
Gene namesi
Name:ncam2Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 9

Organism-specific databases

ZFINiZDB-GENE-010822-1 ncam2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei692 – 715HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501410765719 – 795Sequence analysisAdd BLAST777

Expressioni

Gene expression databases

BgeeiENSDARG00000017466

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 107Ig-likeInterPro annotationAdd BLAST88
Domaini112 – 195Ig-likeInterPro annotationAdd BLAST84
Domaini206 – 295Ig-likeInterPro annotationAdd BLAST90
Domaini300 – 394Ig-likeInterPro annotationAdd BLAST95
Domaini399 – 489Ig-likeInterPro annotationAdd BLAST91
Domaini493 – 589Fibronectin type-IIIInterPro annotationAdd BLAST97
Domaini591 – 686Fibronectin type-IIIInterPro annotationAdd BLAST96

Keywords - Domaini

RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00910000144011
HOGENOMiHOG000074124
HOVERGENiHBG052579
KOiK06491
OMAiRITNHED
OrthoDBiEOG091G00V0

Family and domain databases

CDDicd00063 FN3, 2 hits
Gene3Di2.60.40.10, 7 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR009138 Neural_cell_adh
PfamiView protein in Pfam
PF00041 fn3, 2 hits
PF07679 I-set, 4 hits
PRINTSiPR01838 NCAMFAMILY
SMARTiView protein in SMART
SM00060 FN3, 2 hits
SM00409 IG, 5 hits
SM00408 IGc2, 5 hits
SUPFAMiSSF48726 SSF48726, 5 hits
SSF49265 SSF49265, 1 hit
PROSITEiView protein in PROSITE
PS50853 FN3, 2 hits
PS50835 IG_LIKE, 5 hits

Sequencei

Sequence statusi: Complete.

Q90YM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRTVLCFLG LLVGGSQGAL QVSISLKKVE LSVGESKFFT CTVIGEPVKL
60 70 80 90 100
EWFNPQGERM VASPRVALHN EGIRSRLTLY NAKIEDAGIY RCQATDAQGE
110 120 130 140 150
TQEATVVLEI YQKLTFRDVR SPQEFRQGEV AEVVCDVTSS PVPVVSWFYN
160 170 180 190 200
NIEITEDTEK FELLQNNNLQ VQKVTKADEG VYRCEARVEA RGEIDFRNII
210 220 230 240 250
LVVNVPPVVS VPQQSFNATA DYGESVTFTC RAYGSPEPDV TWHRKGVQLQ
260 270 280 290 300
ESERYVMRAR GTTLTVRNIQ QDDGGSYTCR ASNKAGEVEH ELFLKVFVQP
310 320 330 340 350
HITKLRNVTA VEGSAAMISC KAEGEPLPEI SWRRASDGHS FSDGDKSPDG
360 370 380 390 400
RVEVRGRYGE SMLTIVVVKL SDWGRFDCEA LSRIGGHQKS MFLDIEYAPK
410 420 430 440 450
FQANHTIFFS WEGNPVNISC DVMSNPPATM LWRREKLTIP SEGAGNMRVY
460 470 480 490 500
TAPGRSLLEV TPMSDRDFGR YNCTARNNIG MRFQEFILAQ ADVPSNPYSV
510 520 530 540 550
RLSSVAQRVA TVTFTKPDSH GGVPISHYLV KYKDISSQDW KDVKSLGTQT
560 570 580 590 600
IVLLTNLEPN TTYEVRVSAV NGKGQGEFSH TESFQTLPIR EPSPPSVQGQ
610 620 630 640 650
RGVGKAYRLG LVKQDDGGMP ILEYIVKYKT DKEEQWMTKL VPGVNDFVLL
660 670 680 690 700
QPLQWNTQYE VEITARNVKG LSEPTVVKFS MPQKPDITAD SLFSGLGLGA
710 720 730 740 750
VVGLGLAGLL LLLVLVDVSC FFLRQCGLLM CITRKLCSKK TATSGKSKEL
760 770 780 790
EEGKAAYLKL PLKEENGKET LKPDTIEIKL HGDNSLHMTQ EDSKA
Length:795
Mass (Da):88,390
Last modified:December 1, 2001 - v1
Checksum:iDF6D5014C778B387
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX957273 Genomic DNA No translation available.
CR759897 Genomic DNA No translation available.
CR847542 Genomic DNA No translation available.
CU074387 Genomic DNA No translation available.
BC162324 mRNA Translation: AAI62324.1
AY029403 mRNA Translation: AAK38468.1
RefSeqiNP_571905.1, NM_131830.2
UniGeneiDr.133217

Genome annotation databases

EnsembliENSDART00000100681; ENSDARP00000091454; ENSDARG00000017466
GeneIDi114441
KEGGidre:114441

Similar proteinsi

Entry informationi

Entry nameiQ90YM0_DANRE
AccessioniPrimary (citable) accession number: Q90YM0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: March 28, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health