Q90X95 (Q90X95_XENLA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
BRCA1-associated RING domain protein EMBL AAL13038.1

Gene names

Name:	bard1 Xenbase XB-FEAT-492034 Xenbase XB-GENE-492039 Xenbase XB-FEAT-492039
Synonyms:	BARD1 EMBL AAL13038.1

Organism

Xenopus laevis (African clawed frog) EMBL AAL13038.1

Taxonomic identifier

8355 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Mesobatrachia › Pipoidea › Pipidae › Xenopodinae › Xenopus › Xenopus

Protein attributes

Sequence length	772 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Domain	ANK repeat RuleBase RU003321 Repeat RuleBase RU003536 Zinc-finger RuleBase RU000353
Ligand	Metal-binding Zinc
Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
brca1	Q90X96	2	EBI-1165318,EBI-1165296

Sequences

	Sequence		Length	Mass (Da)
	Q90X95 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 2BA4E6DDD56117B3	FASTA	772	86,915
	10 20 30 40 50 60 MLLRVRSGNR PSETAVREEL PMMDEPGWER TRDALREMER KLCCSKCMFI LKDPVCLGGC 70 80 90 100 110 120 EHVFCWTCVN ENLGNECPLC NTPAWVRDVQ VNRQLDNMIQ LCAKLRNLLS MGKTDENKMD 130 140 150 160 170 180 LCQDTLLRLN PAQEKQKKKQ IKMWFSPRSR KVRCVVEKKE KSQQISSKTL PQMASYEFVS 190 200 210 220 230 240 DSPDGEPAQK KPDPKPRKRM KKKLKDINAE WGVDTENEID EVSNPRKEHK SGKSVSFCSS 250 260 270 280 290 300 AVIQHSPEVL VVESSLKNDT PEEISPNWNK CGLDEPMEMQ STSMKEVNCP SPSEQSTTLK 310 320 330 340 350 360 TQDKEKKITT VKRKKHSSPI ASSKRPRRRS SDTSKPLNDS DIKANSPEKA CKTVSPHKPS 370 380 390 400 410 420 ENSAKDVRIE STQAAKRDTK MCSTPLPCAK QNNSAKLGQK STAMPISPNN LTNVKRNYKG 430 440 450 460 470 480 ETMLHLASIK GDIQGVEDLL NSGANPNVKD NAGWTPLHEA CNLGHTMVVQ LLLQHHALMN 490 500 510 520 530 540 TTGYQNDTPL HDAVKNGHIA IVKLLLSHGA SRDAVNIFGL QPVDYAETEE MKSVLLETQT 550 560 570 580 590 600 ERDRLLLHPC LAAPQLSSHQ RKEEAVVLIA SGLLATQRAD LTKLAKMLKA SICAEYDSTV 610 620 630 640 650 660 THVIVSDEPV LRTMKCMMGI LAGCWTLQFS WVKACLQSCN REPEESYEIP HGPHRARLNG 670 680 690 700 710 720 QQMLPQLLDG CHFYFLGCFT EHRKEDLIEL VKAAGGQILI RQPKPDSDVT QTINTVAYHA 730 740 750 760 770 EADSDQRFCT QYIVFDRASK YRPERVRQGK VWFAPSSWII ECITSFQLLP VH

References

[1]	"Functional communication between endogenous BRCA1 and its partner, BARD1, during Xenopus laevis development." Joukov V., Chen J., Fox E.A., Green J.B., Livingston D.M. Proc. Natl. Acad. Sci. U.S.A. 98:12078-12083(2001) [PubMed: 11593018] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF416869 mRNA. Translation: AAL13038.1.
RefSeq	NP_001082131.1. NM_001088662.1.
UniGene	Xl.12056.
3D structure databases
HSSP	HSSP built from PDB template 1JM7 based on UniProtKB Q99728.
ProteinModelPortal	Q90X95.
SMR	Q90X95. Positions 24-112, 417-536, 566-771.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q90X95. 2 interactions.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	398242.
KEGG	xla:398242.
Organism-specific databases
CTD	580.
Xenbase	XB-GENE-492039. bard1.
Phylogenomic databases
HOVERGEN	HBG050662.
Family and domain databases
InterPro	IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. IPR001357. BRCT. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view]
Gene3D	G3DSA:1.25.40.20. ANK. 1 hit. G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
KO	K10683.
Pfam	PF00023. Ank. 1 hit. PF12796. Ank_2. 1 hit. PF00533. BRCT. 2 hits. [Graphical view]
PRINTS	PR01415. ANKYRIN.
SMART	SM00248. ANK. 3 hits. SM00292. BRCT. 2 hits. SM00184. RING. 1 hit. [Graphical view]
SUPFAM	SSF48403. ANK. 1 hit. SSF52113. BRCT. 2 hits.
PROSITE	PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 3 hits. PS50172. BRCT. 2 hits. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q90X95_XENLA

Accession

Primary (citable) accession number: Q90X95

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	November 16, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)